Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim63Q38HM4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim63Q38HM4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim63Q38HM4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trim63Q38HM4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim63Q38HM4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim63Q38HM4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
Trim63Q38HM4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim63Q38HM4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim63Q38HM4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim63Q38HM4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim63Q38HM4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Trim63Q38HM4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim63Q38HM4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim63Q38HM4 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.91■□□□□ 0.46
Trim63Q38HM4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim63Q38HM4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim63Q38HM4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim63Q38HM4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim63Q38HM4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim63Q38HM4 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.91■□□□□ 0.46
Trim63Q38HM4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim63Q38HM4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim63Q38HM4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim63Q38HM4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim63Q38HM4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.9■□□□□ 0.46
Trim63Q38HM4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim63Q38HM4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Trim63Q38HM4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.9■□□□□ 0.46
Trim63Q38HM4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trim63Q38HM4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim63Q38HM4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim63Q38HM4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim63Q38HM4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim63Q38HM4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trim63Q38HM4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC17.89■□□□□ 0.45
Trim63Q38HM4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trim63Q38HM4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim63Q38HM4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim63Q38HM4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trim63Q38HM4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim63Q38HM4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim63Q38HM4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trim63Q38HM4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim63Q38HM4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim63Q38HM4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Trim63Q38HM4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim63Q38HM4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim63Q38HM4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trim63Q38HM4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trim63Q38HM4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim63Q38HM4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim63Q38HM4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim63Q38HM4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim63Q38HM4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim63Q38HM4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim63Q38HM4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim63Q38HM4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim63Q38HM4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.87■□□□□ 0.45
Trim63Q38HM4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim63Q38HM4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim63Q38HM4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.86■□□□□ 0.45
Trim63Q38HM4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trim63Q38HM4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim63Q38HM4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trim63Q38HM4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim63Q38HM4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim63Q38HM4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trim63Q38HM4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.85■□□□□ 0.45
Trim63Q38HM4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim63Q38HM4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim63Q38HM4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trim63Q38HM4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim63Q38HM4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim63Q38HM4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim63Q38HM4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trim63Q38HM4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trim63Q38HM4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim63Q38HM4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim63Q38HM4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trim63Q38HM4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim63Q38HM4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim63Q38HM4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim63Q38HM4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.84■□□□□ 0.45
Trim63Q38HM4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim63Q38HM4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim63Q38HM4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Trim63Q38HM4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim63Q38HM4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim63Q38HM4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trim63Q38HM4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim63Q38HM4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim63Q38HM4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim63Q38HM4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim63Q38HM4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim63Q38HM4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim63Q38HM4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim63Q38HM4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim63Q38HM4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim63Q38HM4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms