Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 YGR176WYGR176W 348 nt9.04□□□□□ -0.96
RKR1Q04781 PGU1YJR153W 1086 nt9.04□□□□□ -0.96
RKR1Q04781 NPP1YCR026C 2229 nt9.04□□□□□ -0.96
RKR1Q04781 PET112YBL080C 1626 nt9.03□□□□□ -0.96
RKR1Q04781 YAP1801YHR161C 1914 nt9.03□□□□□ -0.96
RKR1Q04781 FRS2YFL022C 1512 nt9.03□□□□□ -0.96
RKR1Q04781 RPT3YDR394W 1287 nt9.03□□□□□ -0.96
RKR1Q04781 PRO3YER023W 861 nt9.03□□□□□ -0.96
RKR1Q04781 DMA1YHR115C 1251 nt9.02□□□□□ -0.97
RKR1Q04781 GLE1YDL207W 1617 nt9.01□□□□□ -0.97
RKR1Q04781 CAD1YDR423C 1230 nt9□□□□□ -0.97
RKR1Q04781 HSP12YFL014W 330 nt9□□□□□ -0.97
RKR1Q04781 SUP19tS(UGA)E 82 nt9□□□□□ -0.97
RKR1Q04781 SUP17tS(UGA)I 82 nt9□□□□□ -0.97
RKR1Q04781 SUP16tS(UGA)P 82 nt9□□□□□ -0.97
RKR1Q04781 ECM15YBL001C 315 nt9□□□□□ -0.97
RKR1Q04781 DAL82YNL314W 768 nt8.99□□□□□ -0.97
RKR1Q04781 GIR2YDR152W 798 nt8.99□□□□□ -0.97
RKR1Q04781 YRA1YDR381W 681 nt8.99□□□□□ -0.97
RKR1Q04781 YNL296WYNL296W 315 nt8.99□□□□□ -0.97
RKR1Q04781 RTT106YNL206C 1368 nt8.99□□□□□ -0.97
RKR1Q04781 NOB1YOR056C 1380 nt8.98□□□□□ -0.97
RKR1Q04781 NDC1YML031W 1968 nt8.97□□□□□ -0.97
RKR1Q04781 YPR204WYPR204W 3099 nt8.97□□□□□ -0.97
RKR1Q04781 PRP46YPL151C 1356 nt8.97□□□□□ -0.97
RKR1Q04781 YJR115WYJR115W 510 nt8.97□□□□□ -0.97
RKR1Q04781 ARG81YML099C 2643 nt8.96□□□□□ -0.97
RKR1Q04781 EEB1YPL095C 1371 nt8.96□□□□□ -0.97
RKR1Q04781 YEA6YEL006W 1008 nt8.96□□□□□ -0.97
RKR1Q04781 YKL151CYKL151C 1014 nt8.96□□□□□ -0.97
RKR1Q04781 HIS7YBR248C 1659 nt8.95□□□□□ -0.98
RKR1Q04781 SLO1YER180C-A 258 nt8.95□□□□□ -0.98
RKR1Q04781 YML083CYML083C 1257 nt8.95□□□□□ -0.98
RKR1Q04781 TIM54YJL054W 1437 nt8.95□□□□□ -0.98
RKR1Q04781 CIS3YJL158C 684 nt8.95□□□□□ -0.98
RKR1Q04781 YLL059CYLL059C 507 nt8.95□□□□□ -0.98
RKR1Q04781 tN(GUU)CtN(GUU)C 74 nt8.94□□□□□ -0.98
RKR1Q04781 tN(GUU)FtN(GUU)F 74 nt8.94□□□□□ -0.98
RKR1Q04781 tN(GUU)GtN(GUU)G 74 nt8.94□□□□□ -0.98
RKR1Q04781 tN(GUU)KtN(GUU)K 74 nt8.94□□□□□ -0.98
RKR1Q04781 tN(GUU)LtN(GUU)L 74 nt8.94□□□□□ -0.98
RKR1Q04781 tN(GUU)N1tN(GUU)N1 74 nt8.94□□□□□ -0.98
RKR1Q04781 tN(GUU)N2tN(GUU)N2 74 nt8.94□□□□□ -0.98
RKR1Q04781 tN(GUU)O1tN(GUU)O1 74 nt8.94□□□□□ -0.98
RKR1Q04781 tN(GUU)O2tN(GUU)O2 74 nt8.94□□□□□ -0.98
RKR1Q04781 tN(GUU)PtN(GUU)P 74 nt8.94□□□□□ -0.98
RKR1Q04781 RPT6YGL048C 1218 nt8.93□□□□□ -0.98
RKR1Q04781 IPI1YHR085W 1005 nt8.93□□□□□ -0.98
RKR1Q04781 NPA3YJR072C 1158 nt8.92□□□□□ -0.98
RKR1Q04781 YER010CYER010C 705 nt8.91□□□□□ -0.98
RKR1Q04781 BBP1YPL255W 1158 nt8.91□□□□□ -0.98
RKR1Q04781 ECM38YLR299W 1983 nt8.91□□□□□ -0.98
RKR1Q04781 MOD5YOR274W 1287 nt8.9□□□□□ -0.98
RKR1Q04781 YML082WYML082W 1950 nt8.9□□□□□ -0.98
RKR1Q04781 RQC1YDR333C 2172 nt8.9□□□□□ -0.99
RKR1Q04781 SMK1YPR054W 1167 nt8.9□□□□□ -0.99
RKR1Q04781 DUS4YLR405W 1104 nt8.88□□□□□ -0.99
RKR1Q04781 RRN10YBL025W 438 nt8.86□□□□□ -0.99
RKR1Q04781 YLR118CYLR118C 684 nt8.86□□□□□ -0.99
RKR1Q04781 YOR318CYOR318C 306 nt8.86□□□□□ -0.99
RKR1Q04781 SAM4YPL273W 978 nt8.86□□□□□ -0.99
RKR1Q04781 SHE10YGL228W 1734 nt8.86□□□□□ -0.99
RKR1Q04781 YUR1YJL139C 1287 nt8.85□□□□□ -0.99
RKR1Q04781 RCL1YOL010W 1104 nt8.85□□□□□ -0.99
RKR1Q04781 YJU3YKL094W 942 nt8.84□□□□□ -0.99
RKR1Q04781 MIM2YLR099W-A 264 nt8.84□□□□□ -0.99
RKR1Q04781 MRPL4YLR439W 960 nt8.84□□□□□ -0.99
RKR1Q04781 PPS1YBR276C 2424 nt8.84□□□□□ -0.99
RKR1Q04781 AGP2YBR132C 1791 nt8.83□□□□□ -1
RKR1Q04781 FAA4YMR246W 2085 nt8.83□□□□□ -1
RKR1Q04781 MHR1YDR296W 681 nt8.82□□□□□ -1
RKR1Q04781 LYS12YIL094C 1116 nt8.82□□□□□ -1
RKR1Q04781 COS9YKL219W 1224 nt8.82□□□□□ -1
RKR1Q04781 YME1YPR024W 2244 nt8.82□□□□□ -1
RKR1Q04781 YHR127WYHR127W 732 nt8.82□□□□□ -1
RKR1Q04781 TFS1YLR178C 660 nt8.82□□□□□ -1
RKR1Q04781 ATO2YNR002C 849 nt8.82□□□□□ -1
RKR1Q04781 CIR2YOR356W 1896 nt8.81□□□□□ -1
RKR1Q04781 DIA3YDL024C 1407 nt8.81□□□□□ -1
RKR1Q04781 IPK1YDR315C 846 nt8.81□□□□□ -1
RKR1Q04781 PAD1YDR538W 729 nt8.81□□□□□ -1
RKR1Q04781 YML133CYML133C 4125 nt8.8□□□□□ -1
RKR1Q04781 COX26YDR119W-A 201 nt8.8□□□□□ -1
RKR1Q04781 EFM3YJR129C 1020 nt8.8□□□□□ -1
RKR1Q04781 YOL097W-AYOL097W-A 186 nt8.79□□□□□ -1
RKR1Q04781 YOL163WYOL163W 510 nt8.78□□□□□ -1
RKR1Q04781 YBR016WYBR016W 387 nt8.78□□□□□ -1
RKR1Q04781 IFA38YBR159W 1044 nt8.78□□□□□ -1
RKR1Q04781 ARP3YJR065C 1350 nt8.78□□□□□ -1
RKR1Q04781 YHL017WYHL017W 1599 nt8.77□□□□□ -1
RKR1Q04781 MNN5YJL186W 1761 nt8.77□□□□□ -1
RKR1Q04781 YHR131CYHR131C 2553 nt8.77□□□□□ -1.01
RKR1Q04781 TAL1YLR354C 1008 nt8.77□□□□□ -1.01
RKR1Q04781 PIN2YOR104W 849 nt8.77□□□□□ -1.01
RKR1Q04781 HAP2YGL237C 798 nt8.76□□□□□ -1.01
RKR1Q04781 MMP1YLL061W 1752 nt8.76□□□□□ -1.01
RKR1Q04781 CTF8YHR191C 402 nt8.75□□□□□ -1.01
RKR1Q04781 SUP2tY(GUA)D 75 nt8.75□□□□□ -1.01
RKR1Q04781 SUP11tY(GUA)F1 75 nt8.75□□□□□ -1.01
RKR1Q04781 SUP6tY(GUA)F2 75 nt8.75□□□□□ -1.01
Retrieved 100 of 7,029 protein–RNA pairs in 117 ms