Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cacna1aP97445 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cacna1aP97445 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cacna1aP97445 Gm40881-201ENSMUST00000223397 166 ntBASIC20.09■□□□□ 0.81
Cacna1aP97445 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.09■□□□□ 0.81
Cacna1aP97445 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cacna1aP97445 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cacna1aP97445 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cacna1aP97445 Gm18284-201ENSMUST00000172604 624 ntBASIC20.08■□□□□ 0.8
Cacna1aP97445 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cacna1aP97445 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cacna1aP97445 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.07■□□□□ 0.8
Cacna1aP97445 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Cacna1aP97445 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cacna1aP97445 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cacna1aP97445 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.07■□□□□ 0.8
Cacna1aP97445 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cacna1aP97445 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
Cacna1aP97445 Gm12821-201ENSMUST00000120022 600 ntBASIC20.06■□□□□ 0.8
Cacna1aP97445 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cacna1aP97445 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cacna1aP97445 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
Cacna1aP97445 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cacna1aP97445 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cacna1aP97445 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cacna1aP97445 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cacna1aP97445 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cacna1aP97445 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cacna1aP97445 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cacna1aP97445 Golgb1-201ENSMUST00000023534 498 ntBASIC20.05■□□□□ 0.8
Cacna1aP97445 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cacna1aP97445 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cacna1aP97445 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.05■□□□□ 0.8
Cacna1aP97445 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.05■□□□□ 0.8
Cacna1aP97445 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.05■□□□□ 0.8
Cacna1aP97445 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cacna1aP97445 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cacna1aP97445 Gm10399-202ENSMUST00000202768 748 ntBASIC20.04■□□□□ 0.8
Cacna1aP97445 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cacna1aP97445 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cacna1aP97445 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cacna1aP97445 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.03■□□□□ 0.8
Cacna1aP97445 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1aP97445 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1aP97445 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1aP97445 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Cacna1aP97445 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
Cacna1aP97445 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1aP97445 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1aP97445 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1aP97445 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1aP97445 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.02■□□□□ 0.8
Cacna1aP97445 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cacna1aP97445 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cacna1aP97445 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cacna1aP97445 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.02■□□□□ 0.8
Cacna1aP97445 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cacna1aP97445 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.02■□□□□ 0.79
Cacna1aP97445 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1aP97445 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.01■□□□□ 0.79
Cacna1aP97445 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.01■□□□□ 0.79
Cacna1aP97445 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1aP97445 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1aP97445 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1aP97445 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1aP97445 AC112142.1-201ENSMUST00000228796 918 ntBASIC20■□□□□ 0.79
Cacna1aP97445 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1aP97445 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20■□□□□ 0.79
Cacna1aP97445 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1aP97445 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1aP97445 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1aP97445 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1aP97445 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.99■□□□□ 0.79
Cacna1aP97445 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cacna1aP97445 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cacna1aP97445 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cacna1aP97445 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.98■□□□□ 0.79
Cacna1aP97445 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1aP97445 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Cacna1aP97445 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.98■□□□□ 0.79
Cacna1aP97445 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1aP97445 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1aP97445 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1aP97445 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1aP97445 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cacna1aP97445 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1aP97445 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1aP97445 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1aP97445 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
Cacna1aP97445 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1aP97445 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1aP97445 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.96■□□□□ 0.79
Cacna1aP97445 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1aP97445 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1aP97445 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1aP97445 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1aP97445 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1aP97445 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cacna1aP97445 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Cacna1aP97445 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms