Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf1P81269 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf1P81269 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Atf1P81269 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Atf1P81269 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atf1P81269 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf1P81269 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atf1P81269 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf1P81269 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Atf1P81269 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Atf1P81269 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.67■□□□□ 0.58
Atf1P81269 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Atf1P81269 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Atf1P81269 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf1P81269 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Atf1P81269 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.66■□□□□ 0.58
Atf1P81269 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Atf1P81269 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf1P81269 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf1P81269 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.66■□□□□ 0.58
Atf1P81269 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.66■□□□□ 0.58
Atf1P81269 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf1P81269 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.65■□□□□ 0.58
Atf1P81269 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf1P81269 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf1P81269 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf1P81269 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atf1P81269 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Atf1P81269 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.65■□□□□ 0.58
Atf1P81269 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf1P81269 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.65■□□□□ 0.58
Atf1P81269 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Atf1P81269 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Atf1P81269 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf1P81269 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.64■□□□□ 0.57
Atf1P81269 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf1P81269 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf1P81269 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.64■□□□□ 0.57
Atf1P81269 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf1P81269 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf1P81269 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf1P81269 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf1P81269 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf1P81269 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf1P81269 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Atf1P81269 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf1P81269 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf1P81269 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf1P81269 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf1P81269 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.63■□□□□ 0.57
Atf1P81269 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf1P81269 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Atf1P81269 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf1P81269 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Atf1P81269 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf1P81269 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Atf1P81269 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Atf1P81269 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf1P81269 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Atf1P81269 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf1P81269 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.62■□□□□ 0.57
Atf1P81269 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Atf1P81269 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf1P81269 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf1P81269 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Atf1P81269 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf1P81269 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Atf1P81269 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.61■□□□□ 0.57
Atf1P81269 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf1P81269 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf1P81269 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.6■□□□□ 0.57
Atf1P81269 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atf1P81269 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.6■□□□□ 0.57
Atf1P81269 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf1P81269 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atf1P81269 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Atf1P81269 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.6■□□□□ 0.57
Atf1P81269 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Atf1P81269 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atf1P81269 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
Atf1P81269 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atf1P81269 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atf1P81269 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Atf1P81269 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Atf1P81269 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf1P81269 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Atf1P81269 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf1P81269 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf1P81269 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf1P81269 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf1P81269 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Atf1P81269 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf1P81269 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Atf1P81269 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Atf1P81269 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf1P81269 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Atf1P81269 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Atf1P81269 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.57■□□□□ 0.56
Atf1P81269 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf1P81269 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 147.3 ms