Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIST1H3AP68431 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIST1H3AP68431 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIST1H3AP68431 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIST1H3AP68431 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HIST1H3AP68431 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.89■□□□□ 0.93
HIST1H3AP68431 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
HIST1H3AP68431 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIST1H3AP68431 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIST1H3AP68431 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.88■□□□□ 0.93
HIST1H3AP68431 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIST1H3AP68431 AC142381.3-201ENST00000568208 1670 ntBASIC20.88■□□□□ 0.93
HIST1H3AP68431 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIST1H3AP68431 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.87■□□□□ 0.93
HIST1H3AP68431 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.87■□□□□ 0.93
HIST1H3AP68431 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIST1H3AP68431 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIST1H3AP68431 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIST1H3AP68431 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIST1H3AP68431 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.87■□□□□ 0.93
HIST1H3AP68431 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIST1H3AP68431 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIST1H3AP68431 AC009831.1-201ENST00000580420 1582 ntBASIC20.87■□□□□ 0.93
HIST1H3AP68431 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIST1H3AP68431 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIST1H3AP68431 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIST1H3AP68431 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HIST1H3AP68431 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIST1H3AP68431 AC022211.4-201ENST00000625094 2161 ntBASIC20.86■□□□□ 0.93
HIST1H3AP68431 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIST1H3AP68431 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIST1H3AP68431 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIST1H3AP68431 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.85■□□□□ 0.93
HIST1H3AP68431 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIST1H3AP68431 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIST1H3AP68431 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H3AP68431 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H3AP68431 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H3AP68431 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H3AP68431 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.84■□□□□ 0.93
HIST1H3AP68431 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H3AP68431 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.84■□□□□ 0.93
HIST1H3AP68431 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
HIST1H3AP68431 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H3AP68431 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H3AP68431 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HIST1H3AP68431 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HIST1H3AP68431 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HIST1H3AP68431 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.83■□□□□ 0.93
HIST1H3AP68431 AC135731.1-201ENST00000569415 2548 ntBASIC20.83■□□□□ 0.93
HIST1H3AP68431 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.83■□□□□ 0.93
HIST1H3AP68431 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HIST1H3AP68431 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HIST1H3AP68431 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HIST1H3AP68431 HSD17B1P1-201ENST00000590052 955 ntBASIC20.83■□□□□ 0.93
HIST1H3AP68431 AC133552.2-201ENST00000619106 1032 ntBASIC20.83■□□□□ 0.93
HIST1H3AP68431 SLC6A10P-202ENST00000431994 2058 ntBASIC20.82■□□□□ 0.92
HIST1H3AP68431 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H3AP68431 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H3AP68431 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H3AP68431 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HIST1H3AP68431 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H3AP68431 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H3AP68431 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H3AP68431 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H3AP68431 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HIST1H3AP68431 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HIST1H3AP68431 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HIST1H3AP68431 KRT18P10-201ENST00000388836 1287 ntBASIC20.81■□□□□ 0.92
HIST1H3AP68431 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HIST1H3AP68431 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HIST1H3AP68431 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HIST1H3AP68431 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.81■□□□□ 0.92
HIST1H3AP68431 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.81■□□□□ 0.92
HIST1H3AP68431 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HIST1H3AP68431 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
HIST1H3AP68431 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HIST1H3AP68431 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HIST1H3AP68431 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
HIST1H3AP68431 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HIST1H3AP68431 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HIST1H3AP68431 RARRES2P2-201ENST00000394842 485 ntBASIC20.8■□□□□ 0.92
HIST1H3AP68431 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HIST1H3AP68431 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HIST1H3AP68431 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HIST1H3AP68431 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HIST1H3AP68431 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HIST1H3AP68431 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HIST1H3AP68431 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HIST1H3AP68431 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.79■□□□□ 0.92
HIST1H3AP68431 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HIST1H3AP68431 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HIST1H3AP68431 AC138932.3-201ENST00000567634 1902 ntBASIC20.78■□□□□ 0.92
HIST1H3AP68431 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H3AP68431 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H3AP68431 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H3AP68431 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H3AP68431 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.78■□□□□ 0.92
HIST1H3AP68431 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H3AP68431 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 191.7 ms