Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.93■■□□□ 1.1
SMIM11AP58511 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM11AP58511 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM11AP58511 ZNRF2P2-203ENST00000454624 420 ntBASIC21.92■■□□□ 1.1
SMIM11AP58511 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.92■■□□□ 1.1
SMIM11AP58511 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM11AP58511 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.92■■□□□ 1.1
SMIM11AP58511 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SMIM11AP58511 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM11AP58511 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM11AP58511 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM11AP58511 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM11AP58511 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SMIM11AP58511 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.91■■□□□ 1.1
SMIM11AP58511 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.91■■□□□ 1.1
SMIM11AP58511 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM11AP58511 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM11AP58511 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.9■■□□□ 1.1
SMIM11AP58511 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.9■■□□□ 1.1
SMIM11AP58511 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM11AP58511 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.9■■□□□ 1.1
SMIM11AP58511 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM11AP58511 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SMIM11AP58511 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
SMIM11AP58511 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
SMIM11AP58511 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMIM11AP58511 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
SMIM11AP58511 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMIM11AP58511 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM11AP58511 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.88■■□□□ 1.09
SMIM11AP58511 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM11AP58511 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.88■■□□□ 1.09
SMIM11AP58511 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SMIM11AP58511 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SMIM11AP58511 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM11AP58511 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM11AP58511 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SMIM11AP58511 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM11AP58511 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM11AP58511 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM11AP58511 LINC01124-201ENST00000409786 2117 ntBASIC21.87■■□□□ 1.09
SMIM11AP58511 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SMIM11AP58511 SLC6A10P-202ENST00000431994 2058 ntBASIC21.87■■□□□ 1.09
SMIM11AP58511 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.87■■□□□ 1.09
SMIM11AP58511 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM11AP58511 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM11AP58511 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM11AP58511 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM11AP58511 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM11AP58511 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SMIM11AP58511 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM11AP58511 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM11AP58511 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM11AP58511 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM11AP58511 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM11AP58511 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
SMIM11AP58511 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM11AP58511 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM11AP58511 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM11AP58511 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM11AP58511 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
SMIM11AP58511 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM11AP58511 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM11AP58511 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM11AP58511 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.85■■□□□ 1.09
SMIM11AP58511 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM11AP58511 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM11AP58511 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM11AP58511 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM11AP58511 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM11AP58511 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM11AP58511 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM11AP58511 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM11AP58511 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMIM11AP58511 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMIM11AP58511 AC141586.4-201ENST00000624558 1573 ntBASIC21.82■■□□□ 1.08
SMIM11AP58511 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM11AP58511 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM11AP58511 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM11AP58511 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM11AP58511 CR559946.2-201ENST00000623684 991 ntBASIC21.82■■□□□ 1.08
SMIM11AP58511 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM11AP58511 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMIM11AP58511 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMIM11AP58511 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.81■■□□□ 1.08
SMIM11AP58511 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMIM11AP58511 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMIM11AP58511 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.8■■□□□ 1.08
SMIM11AP58511 LINC00543-201ENST00000567234 1845 ntBASIC21.8■■□□□ 1.08
SMIM11AP58511 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM11AP58511 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.8■■□□□ 1.08
SMIM11AP58511 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.8■■□□□ 1.08
SMIM11AP58511 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM11AP58511 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM11AP58511 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SMIM11AP58511 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM11AP58511 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.79■■□□□ 1.08
SMIM11AP58511 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM11AP58511 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM11AP58511 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms