Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh11P55288 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.57■□□□□ 0.72
Cdh11P55288 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh11P55288 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh11P55288 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh11P55288 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh11P55288 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.56■□□□□ 0.72
Cdh11P55288 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.56■□□□□ 0.72
Cdh11P55288 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh11P55288 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh11P55288 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh11P55288 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh11P55288 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh11P55288 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh11P55288 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh11P55288 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.54■□□□□ 0.72
Cdh11P55288 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh11P55288 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Cdh11P55288 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh11P55288 Terc-201ENSMUST00000082862 423 ntBASIC19.54■□□□□ 0.72
Cdh11P55288 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh11P55288 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh11P55288 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh11P55288 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh11P55288 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh11P55288 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh11P55288 Gm7332-201ENSMUST00000118351 454 ntBASIC19.53■□□□□ 0.72
Cdh11P55288 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh11P55288 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh11P55288 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh11P55288 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh11P55288 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Cdh11P55288 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh11P55288 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh11P55288 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh11P55288 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cdh11P55288 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh11P55288 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh11P55288 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh11P55288 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh11P55288 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Cdh11P55288 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh11P55288 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.5■□□□□ 0.71
Cdh11P55288 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Cdh11P55288 Gm14523-201ENSMUST00000117260 558 ntBASIC19.5■□□□□ 0.71
Cdh11P55288 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh11P55288 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh11P55288 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh11P55288 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh11P55288 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Cdh11P55288 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh11P55288 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.49■□□□□ 0.71
Cdh11P55288 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh11P55288 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Cdh11P55288 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Cdh11P55288 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh11P55288 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh11P55288 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.48■□□□□ 0.71
Cdh11P55288 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Cdh11P55288 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh11P55288 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cdh11P55288 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.48■□□□□ 0.71
Cdh11P55288 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh11P55288 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh11P55288 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh11P55288 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh11P55288 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Cdh11P55288 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh11P55288 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cdh11P55288 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.47■□□□□ 0.71
Cdh11P55288 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.47■□□□□ 0.71
Cdh11P55288 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh11P55288 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Cdh11P55288 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh11P55288 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh11P55288 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh11P55288 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh11P55288 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh11P55288 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh11P55288 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cdh11P55288 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cdh11P55288 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh11P55288 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh11P55288 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh11P55288 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh11P55288 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Cdh11P55288 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.45■□□□□ 0.7
Cdh11P55288 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh11P55288 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh11P55288 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
Cdh11P55288 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh11P55288 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh11P55288 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh11P55288 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh11P55288 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Cdh11P55288 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh11P55288 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh11P55288 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cdh11P55288 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.43■□□□□ 0.7
Cdh11P55288 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms