Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC34.84■■■■□ 3.17
CLTCL1P53675 MIR4281-201ENST00000580852 62 ntBASIC34.84■■■■□ 3.17
CLTCL1P53675 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
CLTCL1P53675 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC34.84■■■■□ 3.17
CLTCL1P53675 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CLTCL1P53675 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC34.84■■■■□ 3.17
CLTCL1P53675 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC34.84■■■■□ 3.17
CLTCL1P53675 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CLTCL1P53675 KRT18P24-201ENST00000344739 1156 ntBASIC34.84■■■■□ 3.17
CLTCL1P53675 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC34.84■■■■□ 3.17
CLTCL1P53675 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC34.84■■■■□ 3.17
CLTCL1P53675 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC34.84■■■■□ 3.17
CLTCL1P53675 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC34.84■■■■□ 3.17
CLTCL1P53675 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC34.83■■■■□ 3.17
CLTCL1P53675 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC34.83■■■■□ 3.17
CLTCL1P53675 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC34.83■■■■□ 3.17
CLTCL1P53675 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CLTCL1P53675 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC34.82■■■■□ 3.17
CLTCL1P53675 MTURN-203ENST00000409688 843 ntTSL 2 BASIC34.82■■■■□ 3.16
CLTCL1P53675 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC34.82■■■■□ 3.16
CLTCL1P53675 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC34.82■■■■□ 3.16
CLTCL1P53675 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC34.82■■■■□ 3.16
CLTCL1P53675 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
CLTCL1P53675 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
CLTCL1P53675 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
CLTCL1P53675 AC120024.1-201ENST00000562672 995 ntBASIC34.81■■■■□ 3.16
CLTCL1P53675 MIR4787-201ENST00000607364 84 ntBASIC34.81■■■■□ 3.16
CLTCL1P53675 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC34.8■■■■□ 3.16
CLTCL1P53675 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
CLTCL1P53675 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
CLTCL1P53675 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CLTCL1P53675 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC34.79■■■■□ 3.16
CLTCL1P53675 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC34.79■■■■□ 3.16
CLTCL1P53675 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC34.79■■■■□ 3.16
CLTCL1P53675 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC34.79■■■■□ 3.16
CLTCL1P53675 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CLTCL1P53675 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CLTCL1P53675 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
CLTCL1P53675 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
CLTCL1P53675 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
CLTCL1P53675 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CLTCL1P53675 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CLTCL1P53675 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC34.77■■■■□ 3.16
CLTCL1P53675 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
CLTCL1P53675 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC34.76■■■■□ 3.16
CLTCL1P53675 AC137630.3-201ENST00000607245 391 ntBASIC34.76■■■■□ 3.15
CLTCL1P53675 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
CLTCL1P53675 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC34.75■■■■□ 3.15
CLTCL1P53675 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
CLTCL1P53675 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC34.75■■■■□ 3.15
CLTCL1P53675 AC019069.1-201ENST00000610008 1333 ntBASIC34.75■■■■□ 3.15
CLTCL1P53675 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
CLTCL1P53675 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC34.74■■■■□ 3.15
CLTCL1P53675 KRT16P3-201ENST00000439127 1283 ntBASIC34.74■■■■□ 3.15
CLTCL1P53675 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC34.74■■■■□ 3.15
CLTCL1P53675 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC34.74■■■■□ 3.15
CLTCL1P53675 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
CLTCL1P53675 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC34.74■■■■□ 3.15
CLTCL1P53675 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC34.74■■■■□ 3.15
CLTCL1P53675 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
CLTCL1P53675 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC34.73■■■■□ 3.15
CLTCL1P53675 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC34.73■■■■□ 3.15
CLTCL1P53675 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC34.73■■■■□ 3.15
CLTCL1P53675 KRT125P-201ENST00000546827 989 ntBASIC34.73■■■■□ 3.15
CLTCL1P53675 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
CLTCL1P53675 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC34.72■■■■□ 3.15
CLTCL1P53675 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
CLTCL1P53675 AC021242.3-201ENST00000607598 1377 ntBASIC34.72■■■■□ 3.15
CLTCL1P53675 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC34.72■■■■□ 3.15
CLTCL1P53675 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC34.71■■■■□ 3.15
CLTCL1P53675 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC34.7■■■■□ 3.15
CLTCL1P53675 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
CLTCL1P53675 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC34.69■■■■□ 3.14
CLTCL1P53675 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC34.69■■■■□ 3.14
CLTCL1P53675 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC34.69■■■■□ 3.14
CLTCL1P53675 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC34.68■■■■□ 3.14
CLTCL1P53675 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC34.68■■■■□ 3.14
CLTCL1P53675 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
CLTCL1P53675 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
CLTCL1P53675 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC34.66■■■■□ 3.14
CLTCL1P53675 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC34.66■■■■□ 3.14
CLTCL1P53675 LSM7-203ENST00000585409 512 ntTSL 2 BASIC34.66■■■■□ 3.14
CLTCL1P53675 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CLTCL1P53675 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC34.66■■■■□ 3.14
CLTCL1P53675 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CLTCL1P53675 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CLTCL1P53675 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC34.66■■■■□ 3.14
CLTCL1P53675 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC34.66■■■■□ 3.14
CLTCL1P53675 SHF-206ENST00000560471 2499 ntTSL 5 BASIC34.66■■■■□ 3.14
CLTCL1P53675 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC34.65■■■■□ 3.14
CLTCL1P53675 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC34.65■■■■□ 3.14
CLTCL1P53675 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC34.65■■■■□ 3.14
CLTCL1P53675 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC34.65■■■■□ 3.14
CLTCL1P53675 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
CLTCL1P53675 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
CLTCL1P53675 SENP5-202ENST00000419026 973 ntTSL 3 BASIC34.64■■■■□ 3.14
CLTCL1P53675 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC34.64■■■■□ 3.14
CLTCL1P53675 AC011551.1-201ENST00000614101 683 ntBASIC34.64■■■■□ 3.14
CLTCL1P53675 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC34.64■■■■□ 3.14
CLTCL1P53675 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC34.63■■■■□ 3.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms