Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Kdm5cP41230 AC117245.4-201ENSMUST00000217388 1646 ntBASIC32.36■■■□□ 2.77
Kdm5cP41230 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Kdm5cP41230 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC32.34■■■□□ 2.77
Kdm5cP41230 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC32.33■■■□□ 2.77
Kdm5cP41230 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC32.32■■■□□ 2.77
Kdm5cP41230 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC32.32■■■□□ 2.77
Kdm5cP41230 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Kdm5cP41230 AC153524.1-201ENSMUST00000220436 1935 ntBASIC32.32■■■□□ 2.76
Kdm5cP41230 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Kdm5cP41230 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Kdm5cP41230 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC32.32■■■□□ 2.76
Kdm5cP41230 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
Kdm5cP41230 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Kdm5cP41230 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC32.31■■■□□ 2.76
Kdm5cP41230 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC32.31■■■□□ 2.76
Kdm5cP41230 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
Kdm5cP41230 Gm8093-201ENSMUST00000128935 1892 ntBASIC32.31■■■□□ 2.76
Kdm5cP41230 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
Kdm5cP41230 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Kdm5cP41230 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
Kdm5cP41230 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC32.29■■■□□ 2.76
Kdm5cP41230 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
Kdm5cP41230 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
Kdm5cP41230 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC32.28■■■□□ 2.76
Kdm5cP41230 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC32.28■■■□□ 2.76
Kdm5cP41230 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Kdm5cP41230 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Kdm5cP41230 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Kdm5cP41230 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Kdm5cP41230 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC32.27■■■□□ 2.76
Kdm5cP41230 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC32.27■■■□□ 2.76
Kdm5cP41230 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Kdm5cP41230 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
Kdm5cP41230 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Kdm5cP41230 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC32.25■■■□□ 2.75
Kdm5cP41230 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Kdm5cP41230 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Kdm5cP41230 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Kdm5cP41230 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Kdm5cP41230 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Kdm5cP41230 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Kdm5cP41230 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC32.24■■■□□ 2.75
Kdm5cP41230 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
Kdm5cP41230 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC32.24■■■□□ 2.75
Kdm5cP41230 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
Kdm5cP41230 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Kdm5cP41230 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Kdm5cP41230 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Kdm5cP41230 AC122428.3-201ENSMUST00000215551 2290 ntBASIC32.22■■■□□ 2.75
Kdm5cP41230 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC32.22■■■□□ 2.75
Kdm5cP41230 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Kdm5cP41230 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Kdm5cP41230 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC32.21■■■□□ 2.75
Kdm5cP41230 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Kdm5cP41230 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
Kdm5cP41230 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Kdm5cP41230 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Kdm5cP41230 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC32.19■■■□□ 2.74
Kdm5cP41230 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Kdm5cP41230 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Kdm5cP41230 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC32.18■■■□□ 2.74
Kdm5cP41230 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Kdm5cP41230 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Kdm5cP41230 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Kdm5cP41230 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC32.17■■■□□ 2.74
Kdm5cP41230 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC32.17■■■□□ 2.74
Kdm5cP41230 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Kdm5cP41230 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Kdm5cP41230 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
Kdm5cP41230 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Kdm5cP41230 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Kdm5cP41230 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Kdm5cP41230 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC32.15■■■□□ 2.74
Kdm5cP41230 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Kdm5cP41230 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC32.15■■■□□ 2.74
Kdm5cP41230 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Kdm5cP41230 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC32.14■■■□□ 2.74
Kdm5cP41230 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC32.14■■■□□ 2.74
Kdm5cP41230 Gm18284-201ENSMUST00000172604 624 ntBASIC32.13■■■□□ 2.73
Kdm5cP41230 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC32.12■■■□□ 2.73
Kdm5cP41230 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Kdm5cP41230 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC32.11■■■□□ 2.73
Kdm5cP41230 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Kdm5cP41230 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Kdm5cP41230 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Kdm5cP41230 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Kdm5cP41230 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Kdm5cP41230 Gm8495-201ENSMUST00000188740 694 ntBASIC32.11■■■□□ 2.73
Kdm5cP41230 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC32.11■■■□□ 2.73
Kdm5cP41230 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Kdm5cP41230 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Kdm5cP41230 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Kdm5cP41230 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Kdm5cP41230 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
Kdm5cP41230 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Kdm5cP41230 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC32.1■■■□□ 2.73
Kdm5cP41230 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
Kdm5cP41230 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Kdm5cP41230 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms