Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Cdkn1aP39689 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdkn1aP39689 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdkn1aP39689 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cdkn1aP39689 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.86■□□□□ 0.45
Cdkn1aP39689 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdkn1aP39689 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdkn1aP39689 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdkn1aP39689 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdkn1aP39689 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdkn1aP39689 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdkn1aP39689 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Cdkn1aP39689 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdkn1aP39689 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Cdkn1aP39689 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdkn1aP39689 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkn1aP39689 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkn1aP39689 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkn1aP39689 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkn1aP39689 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Cdkn1aP39689 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkn1aP39689 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkn1aP39689 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cdkn1aP39689 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkn1aP39689 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Cdkn1aP39689 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkn1aP39689 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.84■□□□□ 0.45
Cdkn1aP39689 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkn1aP39689 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkn1aP39689 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkn1aP39689 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdkn1aP39689 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdkn1aP39689 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cdkn1aP39689 Rps24-207ENSMUST00000224568 714 ntBASIC17.83■□□□□ 0.44
Cdkn1aP39689 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdkn1aP39689 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdkn1aP39689 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdkn1aP39689 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cdkn1aP39689 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.82■□□□□ 0.44
Cdkn1aP39689 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdkn1aP39689 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cdkn1aP39689 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdkn1aP39689 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cdkn1aP39689 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.81■□□□□ 0.44
Cdkn1aP39689 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdkn1aP39689 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdkn1aP39689 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.81■□□□□ 0.44
Cdkn1aP39689 Gm22567-201ENSMUST00000175542 342 ntBASIC17.81■□□□□ 0.44
Cdkn1aP39689 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdkn1aP39689 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdkn1aP39689 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdkn1aP39689 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdkn1aP39689 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdkn1aP39689 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdkn1aP39689 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.8■□□□□ 0.44
Cdkn1aP39689 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdkn1aP39689 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdkn1aP39689 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.8■□□□□ 0.44
Cdkn1aP39689 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdkn1aP39689 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdkn1aP39689 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdkn1aP39689 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdkn1aP39689 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdkn1aP39689 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cdkn1aP39689 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdkn1aP39689 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdkn1aP39689 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdkn1aP39689 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.79■□□□□ 0.44
Cdkn1aP39689 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.79■□□□□ 0.44
Cdkn1aP39689 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdkn1aP39689 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdkn1aP39689 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdkn1aP39689 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdkn1aP39689 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.78■□□□□ 0.44
Cdkn1aP39689 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdkn1aP39689 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.78■□□□□ 0.44
Cdkn1aP39689 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdkn1aP39689 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdkn1aP39689 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.77■□□□□ 0.44
Cdkn1aP39689 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdkn1aP39689 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdkn1aP39689 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Cdkn1aP39689 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.77■□□□□ 0.43
Cdkn1aP39689 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdkn1aP39689 Gm14117-201ENSMUST00000122417 843 ntBASIC17.76■□□□□ 0.43
Cdkn1aP39689 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdkn1aP39689 Gm9959-201ENSMUST00000068277 390 ntBASIC17.76■□□□□ 0.43
Cdkn1aP39689 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdkn1aP39689 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cdkn1aP39689 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdkn1aP39689 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdkn1aP39689 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdkn1aP39689 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.75■□□□□ 0.43
Cdkn1aP39689 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.75■□□□□ 0.43
Cdkn1aP39689 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.75■□□□□ 0.43
Cdkn1aP39689 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdkn1aP39689 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.75■□□□□ 0.43
Cdkn1aP39689 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdkn1aP39689 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdkn1aP39689 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms