Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Upk2P38575 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Upk2P38575 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Upk2P38575 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upk2P38575 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Upk2P38575 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upk2P38575 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upk2P38575 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.99■□□□□ 0.63
Upk2P38575 Gm12366-201ENSMUST00000121722 873 ntBASIC18.99■□□□□ 0.63
Upk2P38575 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.99■□□□□ 0.63
Upk2P38575 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Upk2P38575 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upk2P38575 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.99■□□□□ 0.63
Upk2P38575 Gm5786-201ENSMUST00000085368 882 ntBASIC18.99■□□□□ 0.63
Upk2P38575 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.99■□□□□ 0.63
Upk2P38575 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upk2P38575 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Upk2P38575 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Upk2P38575 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Upk2P38575 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Upk2P38575 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Upk2P38575 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.98■□□□□ 0.63
Upk2P38575 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Upk2P38575 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Upk2P38575 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.98■□□□□ 0.63
Upk2P38575 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Upk2P38575 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Upk2P38575 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.97■□□□□ 0.63
Upk2P38575 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Upk2P38575 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Upk2P38575 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Upk2P38575 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Upk2P38575 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Upk2P38575 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Upk2P38575 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Upk2P38575 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Upk2P38575 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Upk2P38575 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Upk2P38575 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Upk2P38575 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Upk2P38575 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.96■□□□□ 0.63
Upk2P38575 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Upk2P38575 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Upk2P38575 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Upk2P38575 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Upk2P38575 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.96■□□□□ 0.63
Upk2P38575 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Upk2P38575 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Upk2P38575 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.95■□□□□ 0.62
Upk2P38575 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Upk2P38575 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Upk2P38575 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Upk2P38575 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Upk2P38575 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Upk2P38575 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Upk2P38575 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Upk2P38575 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Upk2P38575 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Upk2P38575 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Upk2P38575 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.94■□□□□ 0.62
Upk2P38575 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Upk2P38575 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Upk2P38575 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Upk2P38575 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Upk2P38575 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Upk2P38575 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Upk2P38575 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Upk2P38575 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Upk2P38575 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upk2P38575 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upk2P38575 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upk2P38575 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upk2P38575 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Upk2P38575 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upk2P38575 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Upk2P38575 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.92■□□□□ 0.62
Upk2P38575 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upk2P38575 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Upk2P38575 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Upk2P38575 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.91■□□□□ 0.62
Upk2P38575 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upk2P38575 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Upk2P38575 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Upk2P38575 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Upk2P38575 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Upk2P38575 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.9■□□□□ 0.62
Upk2P38575 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Upk2P38575 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Upk2P38575 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.9■□□□□ 0.62
Upk2P38575 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.9■□□□□ 0.62
Upk2P38575 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.9■□□□□ 0.62
Upk2P38575 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Upk2P38575 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Upk2P38575 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Upk2P38575 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.89■□□□□ 0.61
Upk2P38575 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.89■□□□□ 0.61
Upk2P38575 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Upk2P38575 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Upk2P38575 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Upk2P38575 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms