Protein–RNA interactions for Protein: P38244

PFF1, Vacuolar membrane protease, yeastyeast

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PFF1P38244 tR(ACG)DtR(ACG)D 73 nt6.96□□□□□ -1.3
PFF1P38244 tR(ACG)EtR(ACG)E 73 nt6.96□□□□□ -1.3
PFF1P38244 tR(ACG)KtR(ACG)K 73 nt6.96□□□□□ -1.3
PFF1P38244 tR(ACG)LtR(ACG)L 73 nt6.96□□□□□ -1.3
PFF1P38244 tR(ACG)OtR(ACG)O 73 nt6.96□□□□□ -1.3
PFF1P38244 RPL21AYBR191W 483 nt6.96□□□□□ -1.3
PFF1P38244 SHM1YBR263W 1473 nt6.96□□□□□ -1.3
PFF1P38244 GPH1YPR160W 2709 nt6.95□□□□□ -1.3
PFF1P38244 YRA1YDR381W 681 nt6.95□□□□□ -1.3
PFF1P38244 YGL194C-AYGL194C-A 243 nt6.95□□□□□ -1.3
PFF1P38244 YKL151CYKL151C 1014 nt6.95□□□□□ -1.3
PFF1P38244 DAL82YNL314W 768 nt6.95□□□□□ -1.3
PFF1P38244 SMK1YPR054W 1167 nt6.95□□□□□ -1.3
PFF1P38244 GUD1YDL238C 1470 nt6.94□□□□□ -1.3
PFF1P38244 RRN10YBL025W 438 nt6.94□□□□□ -1.3
PFF1P38244 AGP2YBR132C 1791 nt6.94□□□□□ -1.3
PFF1P38244 PYC2YBR218C 3543 nt6.93□□□□□ -1.3
PFF1P38244 SUP19tS(UGA)E 82 nt6.93□□□□□ -1.3
PFF1P38244 SUP17tS(UGA)I 82 nt6.93□□□□□ -1.3
PFF1P38244 SUP16tS(UGA)P 82 nt6.93□□□□□ -1.3
PFF1P38244 YBR230W-AYBR230W-A 201 nt6.93□□□□□ -1.3
PFF1P38244 AMD1YML035C 2433 nt6.93□□□□□ -1.3
PFF1P38244 YAP1801YHR161C 1914 nt6.92□□□□□ -1.3
PFF1P38244 YCR075W-AYCR075W-A 228 nt6.92□□□□□ -1.3
PFF1P38244 PRO3YER023W 861 nt6.92□□□□□ -1.3
PFF1P38244 YGR176WYGR176W 348 nt6.92□□□□□ -1.3
PFF1P38244 YHC3YJL059W 1227 nt6.92□□□□□ -1.3
PFF1P38244 PSY4YBL046W 1326 nt6.92□□□□□ -1.3
PFF1P38244 GUT1YHL032C 2130 nt6.91□□□□□ -1.3
PFF1P38244 YIR042CYIR042C 711 nt6.91□□□□□ -1.3
PFF1P38244 QNS1YHR074W 2145 nt6.91□□□□□ -1.3
PFF1P38244 GLE1YDL207W 1617 nt6.9□□□□□ -1.3
PFF1P38244 MHR1YDR296W 681 nt6.9□□□□□ -1.3
PFF1P38244 YPL062WYPL062W 405 nt6.9□□□□□ -1.3
PFF1P38244 KKQ8YKL168C 2175 nt6.88□□□□□ -1.31
PFF1P38244 SGV1YPR161C 1974 nt6.88□□□□□ -1.31
PFF1P38244 APE3YBR286W 1614 nt6.88□□□□□ -1.31
PFF1P38244 ORC5YNL261W 1440 nt6.88□□□□□ -1.31
PFF1P38244 YCR061WYCR061W 1896 nt6.87□□□□□ -1.31
PFF1P38244 VRP1YLR337C 2454 nt6.87□□□□□ -1.31
PFF1P38244 GYP8YFL027C 1494 nt6.87□□□□□ -1.31
PFF1P38244 NOB1YOR056C 1380 nt6.87□□□□□ -1.31
PFF1P38244 YCR097W-AYCR097W-A 267 nt6.87□□□□□ -1.31
PFF1P38244 YEA6YEL006W 1008 nt6.87□□□□□ -1.31
PFF1P38244 SLO1YER180C-A 258 nt6.87□□□□□ -1.31
PFF1P38244 RPT6YGL048C 1218 nt6.87□□□□□ -1.31
PFF1P38244 HSX1tR(CCU)J 72 nt6.87□□□□□ -1.31
PFF1P38244 DJP1YIR004W 1299 nt6.87□□□□□ -1.31
PFF1P38244 MCM3YEL032W 2916 nt6.86□□□□□ -1.31
PFF1P38244 BSC4YNL269W 396 nt6.86□□□□□ -1.31
PFF1P38244 YBR124WYBR124W 360 nt6.86□□□□□ -1.31
PFF1P38244 CLN1YMR199W 1641 nt6.86□□□□□ -1.31
PFF1P38244 RTT106YNL206C 1368 nt6.85□□□□□ -1.31
PFF1P38244 PGM1YKL127W 1713 nt6.85□□□□□ -1.31
PFF1P38244 ERG12YMR208W 1332 nt6.85□□□□□ -1.31
PFF1P38244 YJR115WYJR115W 510 nt6.85□□□□□ -1.31
PFF1P38244 OPI8YKR035C 642 nt6.85□□□□□ -1.31
PFF1P38244 ATP14YLR295C 375 nt6.85□□□□□ -1.31
PFF1P38244 COX5AYNL052W 462 nt6.85□□□□□ -1.31
PFF1P38244 YNL296WYNL296W 315 nt6.85□□□□□ -1.31
PFF1P38244 NDC1YML031W 1968 nt6.85□□□□□ -1.31
PFF1P38244 XBP1YIL101C 1944 nt6.85□□□□□ -1.31
PFF1P38244 ECM38YLR299W 1983 nt6.84□□□□□ -1.31
PFF1P38244 YDR109CYDR109C 2148 nt6.84□□□□□ -1.31
PFF1P38244 SES1YDR023W 1389 nt6.83□□□□□ -1.32
PFF1P38244 COT1YOR316C 1320 nt6.83□□□□□ -1.32
PFF1P38244 RPT3YDR394W 1287 nt6.83□□□□□ -1.32
PFF1P38244 YOR300WYOR300W 309 nt6.83□□□□□ -1.32
PFF1P38244 YOR318CYOR318C 306 nt6.83□□□□□ -1.32
PFF1P38244 MTC1YJL123C 1437 nt6.83□□□□□ -1.32
PFF1P38244 UTR4YEL038W 684 nt6.81□□□□□ -1.32
PFF1P38244 DMA1YHR115C 1251 nt6.81□□□□□ -1.32
PFF1P38244 APS3YJL024C 585 nt6.81□□□□□ -1.32
PFF1P38244 CIS3YJL158C 684 nt6.81□□□□□ -1.32
PFF1P38244 GLN3YER040W 2193 nt6.81□□□□□ -1.32
PFF1P38244 COX9YDL067C 180 nt6.8□□□□□ -1.32
PFF1P38244 YEL053W-AYEL053W-A 348 nt6.8□□□□□ -1.32
PFF1P38244 COA1YIL157C 594 nt6.8□□□□□ -1.32
PFF1P38244 SAM4YPL273W 978 nt6.8□□□□□ -1.32
PFF1P38244 PRP46YPL151C 1356 nt6.8□□□□□ -1.32
PFF1P38244 HAL5YJL165C 2568 nt6.79□□□□□ -1.32
PFF1P38244 TOS2YGR221C 1869 nt6.79□□□□□ -1.32
PFF1P38244 GIT1YCR098C 1557 nt6.79□□□□□ -1.32
PFF1P38244 ATG22YCL038C 1587 nt6.79□□□□□ -1.32
PFF1P38244 TEP1YNL128W 1305 nt6.78□□□□□ -1.32
PFF1P38244 CAD1YDR423C 1230 nt6.78□□□□□ -1.32
PFF1P38244 TFS1YLR178C 660 nt6.78□□□□□ -1.32
PFF1P38244 PIN2YOR104W 849 nt6.78□□□□□ -1.32
PFF1P38244 CSG2YBR036C 1233 nt6.78□□□□□ -1.32
PFF1P38244 VMA2YBR127C 1554 nt6.78□□□□□ -1.32
PFF1P38244 FRS2YFL022C 1512 nt6.77□□□□□ -1.33
PFF1P38244 COX26YDR119W-A 201 nt6.77□□□□□ -1.33
PFF1P38244 BIM1YER016W 1035 nt6.77□□□□□ -1.33
PFF1P38244 IDP3YNL009W 1263 nt6.77□□□□□ -1.33
PFF1P38244 GET3YDL100C 1065 nt6.76□□□□□ -1.33
PFF1P38244 HIS7YBR248C 1659 nt6.76□□□□□ -1.33
PFF1P38244 DAL7YIR031C 1665 nt6.75□□□□□ -1.33
PFF1P38244 EEB1YPL095C 1371 nt6.75□□□□□ -1.33
PFF1P38244 FPR2YDR519W 408 nt6.75□□□□□ -1.33
PFF1P38244 CTF8YHR191C 402 nt6.75□□□□□ -1.33
Retrieved 100 of 7,029 protein–RNA pairs in 46.9 ms