Protein–RNA interactions for Protein: P35460

Ly6f, Lymphocyte antigen 6F, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6fP35460 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ly6fP35460 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ly6fP35460 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ly6fP35460 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ly6fP35460 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ly6fP35460 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.02■□□□□ 0.96
Ly6fP35460 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ly6fP35460 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ly6fP35460 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ly6fP35460 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.02■□□□□ 0.96
Ly6fP35460 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ly6fP35460 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ly6fP35460 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ly6fP35460 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.01■□□□□ 0.95
Ly6fP35460 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.01■□□□□ 0.95
Ly6fP35460 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.01■□□□□ 0.95
Ly6fP35460 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.01■□□□□ 0.95
Ly6fP35460 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ly6fP35460 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Ly6fP35460 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ly6fP35460 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ly6fP35460 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ly6fP35460 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ly6fP35460 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ly6fP35460 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.99■□□□□ 0.95
Ly6fP35460 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ly6fP35460 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.99■□□□□ 0.95
Ly6fP35460 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.99■□□□□ 0.95
Ly6fP35460 Gm40881-201ENSMUST00000223397 166 ntBASIC20.99■□□□□ 0.95
Ly6fP35460 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ly6fP35460 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.99■□□□□ 0.95
Ly6fP35460 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ly6fP35460 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ly6fP35460 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ly6fP35460 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ly6fP35460 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ly6fP35460 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.98■□□□□ 0.95
Ly6fP35460 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ly6fP35460 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ly6fP35460 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ly6fP35460 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ly6fP35460 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ly6fP35460 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ly6fP35460 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ly6fP35460 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.97■□□□□ 0.95
Ly6fP35460 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ly6fP35460 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.97■□□□□ 0.95
Ly6fP35460 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ly6fP35460 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.96■□□□□ 0.95
Ly6fP35460 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ly6fP35460 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ly6fP35460 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ly6fP35460 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ly6fP35460 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Ly6fP35460 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.95■□□□□ 0.94
Ly6fP35460 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.95■□□□□ 0.94
Ly6fP35460 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ly6fP35460 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.95■□□□□ 0.94
Ly6fP35460 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ly6fP35460 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ly6fP35460 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ly6fP35460 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ly6fP35460 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ly6fP35460 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ly6fP35460 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ly6fP35460 Gm22238-201ENSMUST00000175222 88 ntBASIC20.94■□□□□ 0.94
Ly6fP35460 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ly6fP35460 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ly6fP35460 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ly6fP35460 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ly6fP35460 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ly6fP35460 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ly6fP35460 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ly6fP35460 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ly6fP35460 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ly6fP35460 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ly6fP35460 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ly6fP35460 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ly6fP35460 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ly6fP35460 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ly6fP35460 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ly6fP35460 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ly6fP35460 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ly6fP35460 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.9■□□□□ 0.94
Ly6fP35460 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ly6fP35460 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ly6fP35460 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ly6fP35460 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Ly6fP35460 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.9■□□□□ 0.94
Ly6fP35460 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ly6fP35460 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ly6fP35460 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ly6fP35460 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ly6fP35460 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.89■□□□□ 0.93
Ly6fP35460 Gm10399-202ENSMUST00000202768 748 ntBASIC20.89■□□□□ 0.93
Ly6fP35460 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ly6fP35460 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ly6fP35460 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ly6fP35460 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ly6fP35460 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms