Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
RFC4P35249 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC30.52■■■□□ 2.48
RFC4P35249 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
RFC4P35249 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
RFC4P35249 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.52■■■□□ 2.48
RFC4P35249 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
RFC4P35249 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.48
RFC4P35249 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
RFC4P35249 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
RFC4P35249 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
RFC4P35249 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.47
RFC4P35249 MIR3621-201ENST00000580529 85 ntBASIC30.51■■■□□ 2.47
RFC4P35249 AC110285.6-201ENST00000617652 491 ntBASIC30.51■■■□□ 2.47
RFC4P35249 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
RFC4P35249 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RFC4P35249 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC30.5■■■□□ 2.47
RFC4P35249 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
RFC4P35249 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
RFC4P35249 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC30.5■■■□□ 2.47
RFC4P35249 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RFC4P35249 BX255925.1-201ENST00000566954 1854 ntBASIC30.5■■■□□ 2.47
RFC4P35249 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
RFC4P35249 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
RFC4P35249 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
RFC4P35249 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
RFC4P35249 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.48■■■□□ 2.47
RFC4P35249 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.48■■■□□ 2.47
RFC4P35249 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC30.48■■■□□ 2.47
RFC4P35249 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
RFC4P35249 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
RFC4P35249 MIR6724-1-201ENST00000616420 92 ntBASIC30.48■■■□□ 2.47
RFC4P35249 MIR6724-2-201ENST00000616483 92 ntBASIC30.48■■■□□ 2.47
RFC4P35249 MIR6724-4-201ENST00000617390 92 ntBASIC30.48■■■□□ 2.47
RFC4P35249 MIR6724-3-201ENST00000622482 92 ntBASIC30.48■■■□□ 2.47
RFC4P35249 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
RFC4P35249 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
RFC4P35249 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC30.47■■■□□ 2.47
RFC4P35249 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
RFC4P35249 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
RFC4P35249 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
RFC4P35249 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
RFC4P35249 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
RFC4P35249 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
RFC4P35249 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.46■■■□□ 2.47
RFC4P35249 MTDHP2-201ENST00000601468 714 ntBASIC30.46■■■□□ 2.47
RFC4P35249 AC005837.3-201ENST00000612163 286 ntBASIC30.46■■■□□ 2.47
RFC4P35249 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
RFC4P35249 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
RFC4P35249 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.45■■■□□ 2.46
RFC4P35249 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC30.44■■■□□ 2.46
RFC4P35249 AC096631.2-201ENST00000436136 790 ntBASIC30.44■■■□□ 2.46
RFC4P35249 AL356740.2-201ENST00000601559 647 ntBASIC30.44■■■□□ 2.46
RFC4P35249 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC30.44■■■□□ 2.46
RFC4P35249 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
RFC4P35249 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.44■■■□□ 2.46
RFC4P35249 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
RFC4P35249 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC30.43■■■□□ 2.46
RFC4P35249 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC30.43■■■□□ 2.46
RFC4P35249 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.43■■■□□ 2.46
RFC4P35249 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
RFC4P35249 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RFC4P35249 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.42■■■□□ 2.46
RFC4P35249 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC30.42■■■□□ 2.46
RFC4P35249 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC30.41■■■□□ 2.46
RFC4P35249 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC30.41■■■□□ 2.46
RFC4P35249 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC30.41■■■□□ 2.46
RFC4P35249 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
RFC4P35249 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RFC4P35249 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
RFC4P35249 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
RFC4P35249 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC30.4■■■□□ 2.46
RFC4P35249 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
RFC4P35249 MIR4466-201ENST00000606121 54 ntBASIC30.4■■■□□ 2.46
RFC4P35249 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
RFC4P35249 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
RFC4P35249 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
RFC4P35249 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC30.39■■■□□ 2.46
RFC4P35249 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.39■■■□□ 2.46
RFC4P35249 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC30.38■■■□□ 2.45
RFC4P35249 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
RFC4P35249 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
RFC4P35249 SENP5-202ENST00000419026 973 ntTSL 3 BASIC30.38■■■□□ 2.45
RFC4P35249 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC30.38■■■□□ 2.45
RFC4P35249 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC30.38■■■□□ 2.45
RFC4P35249 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC30.38■■■□□ 2.45
RFC4P35249 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.38■■■□□ 2.45
RFC4P35249 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
RFC4P35249 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
RFC4P35249 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC30.37■■■□□ 2.45
RFC4P35249 EXOG-217ENST00000630638 197 ntTSL 5 BASIC30.37■■■□□ 2.45
RFC4P35249 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
RFC4P35249 DRD5P2-201ENST00000421395 2012 ntBASIC30.37■■■□□ 2.45
RFC4P35249 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
RFC4P35249 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
RFC4P35249 LINC01003-201ENST00000564834 1764 ntBASIC30.36■■■□□ 2.45
RFC4P35249 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RFC4P35249 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.36■■■□□ 2.45
RFC4P35249 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC30.35■■■□□ 2.45
RFC4P35249 GAK-223ENST00000628912 497 ntTSL 5 BASIC30.35■■■□□ 2.45
RFC4P35249 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.35■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms