Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf1aP25118 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf1aP25118 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Tnfrsf1aP25118 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf1aP25118 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf1aP25118 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Tnfrsf1aP25118 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf1aP25118 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.03■□□□□ 0.48
Tnfrsf1aP25118 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.03■□□□□ 0.48
Tnfrsf1aP25118 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf1aP25118 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf1aP25118 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf1aP25118 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf1aP25118 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf1aP25118 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.02■□□□□ 0.48
Tnfrsf1aP25118 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf1aP25118 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tnfrsf1aP25118 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tnfrsf1aP25118 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf1aP25118 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf1aP25118 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf1aP25118 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf1aP25118 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf1aP25118 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf1aP25118 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18■□□□□ 0.47
Tnfrsf1aP25118 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf1aP25118 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf1aP25118 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf1aP25118 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf1aP25118 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf1aP25118 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Tnfrsf1aP25118 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf1aP25118 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf1aP25118 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf1aP25118 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf1aP25118 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf1aP25118 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf1aP25118 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf1aP25118 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf1aP25118 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf1aP25118 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf1aP25118 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf1aP25118 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf1aP25118 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf1aP25118 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf1aP25118 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf1aP25118 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf1aP25118 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf1aP25118 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf1aP25118 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.97■□□□□ 0.47
Tnfrsf1aP25118 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfrsf1aP25118 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfrsf1aP25118 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfrsf1aP25118 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfrsf1aP25118 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf1aP25118 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf1aP25118 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Tnfrsf1aP25118 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf1aP25118 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.95■□□□□ 0.46
Tnfrsf1aP25118 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.95■□□□□ 0.46
Tnfrsf1aP25118 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf1aP25118 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Tnfrsf1aP25118 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf1aP25118 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.94■□□□□ 0.46
Tnfrsf1aP25118 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.94■□□□□ 0.46
Tnfrsf1aP25118 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.94■□□□□ 0.46
Tnfrsf1aP25118 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf1aP25118 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf1aP25118 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Tnfrsf1aP25118 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Tnfrsf1aP25118 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Tnfrsf1aP25118 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Tnfrsf1aP25118 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf1aP25118 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.93■□□□□ 0.46
Tnfrsf1aP25118 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf1aP25118 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf1aP25118 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf1aP25118 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Tnfrsf1aP25118 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf1aP25118 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Tnfrsf1aP25118 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf1aP25118 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf1aP25118 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Tnfrsf1aP25118 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.91■□□□□ 0.46
Tnfrsf1aP25118 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.91■□□□□ 0.46
Tnfrsf1aP25118 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf1aP25118 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf1aP25118 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf1aP25118 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf1aP25118 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf1aP25118 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.9■□□□□ 0.46
Tnfrsf1aP25118 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf1aP25118 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf1aP25118 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Tnfrsf1aP25118 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf1aP25118 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf1aP25118 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf1aP25118 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
Tnfrsf1aP25118 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf1aP25118 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms