Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APCP25054 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APCP25054 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
APCP25054 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
APCP25054 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.61■□□□□ 0.89
APCP25054 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
APCP25054 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.61■□□□□ 0.89
APCP25054 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.61■□□□□ 0.89
APCP25054 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
APCP25054 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
APCP25054 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.6■□□□□ 0.89
APCP25054 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.6■□□□□ 0.89
APCP25054 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
APCP25054 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
APCP25054 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.6■□□□□ 0.89
APCP25054 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
APCP25054 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
APCP25054 MTDHP2-201ENST00000601468 714 ntBASIC20.59■□□□□ 0.89
APCP25054 AL355001.2-201ENST00000620617 1191 ntBASIC20.59■□□□□ 0.89
APCP25054 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APCP25054 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
APCP25054 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APCP25054 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APCP25054 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.59■□□□□ 0.89
APCP25054 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
APCP25054 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
APCP25054 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
APCP25054 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
APCP25054 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
APCP25054 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
APCP25054 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
APCP25054 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.58■□□□□ 0.88
APCP25054 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.58■□□□□ 0.88
APCP25054 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.58■□□□□ 0.88
APCP25054 AC105265.2-201ENST00000467189 838 ntBASIC20.58■□□□□ 0.88
APCP25054 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.58■□□□□ 0.88
APCP25054 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
APCP25054 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
APCP25054 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
APCP25054 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.57■□□□□ 0.88
APCP25054 AP002414.2-202ENST00000590929 1450 ntBASIC20.57■□□□□ 0.88
APCP25054 EDA-201ENST00000338901 1233 ntBASIC20.57■□□□□ 0.88
APCP25054 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.57■□□□□ 0.88
APCP25054 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.57■□□□□ 0.88
APCP25054 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
APCP25054 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APCP25054 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.56■□□□□ 0.88
APCP25054 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
APCP25054 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APCP25054 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APCP25054 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
APCP25054 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
APCP25054 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
APCP25054 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
APCP25054 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.55■□□□□ 0.88
APCP25054 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.55■□□□□ 0.88
APCP25054 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.55■□□□□ 0.88
APCP25054 AL139393.2-201ENST00000608721 2025 ntBASIC20.55■□□□□ 0.88
APCP25054 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
APCP25054 KRT18P10-201ENST00000388836 1287 ntBASIC20.55■□□□□ 0.88
APCP25054 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.54■□□□□ 0.88
APCP25054 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
APCP25054 UNC93B3-201ENST00000308076 687 ntBASIC20.54■□□□□ 0.88
APCP25054 AC024257.2-201ENST00000549699 147 ntBASIC20.54■□□□□ 0.88
APCP25054 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
APCP25054 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
APCP25054 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
APCP25054 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.53■□□□□ 0.88
APCP25054 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.53■□□□□ 0.88
APCP25054 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
APCP25054 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
APCP25054 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.52■□□□□ 0.88
APCP25054 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
APCP25054 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
APCP25054 AL136967.2-201ENST00000623968 743 ntBASIC20.52■□□□□ 0.88
APCP25054 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
APCP25054 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
APCP25054 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.51■□□□□ 0.87
APCP25054 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
APCP25054 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APCP25054 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
APCP25054 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.5■□□□□ 0.87
APCP25054 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
APCP25054 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
APCP25054 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.5■□□□□ 0.87
APCP25054 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
APCP25054 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
APCP25054 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.5■□□□□ 0.87
APCP25054 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
APCP25054 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
APCP25054 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
APCP25054 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.49■□□□□ 0.87
APCP25054 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
APCP25054 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
APCP25054 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.49■□□□□ 0.87
APCP25054 RARRES2P11-201ENST00000635158 484 ntBASIC20.49■□□□□ 0.87
APCP25054 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.49■□□□□ 0.87
APCP25054 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
APCP25054 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.49■□□□□ 0.87
APCP25054 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms