Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 ATG22YCL038C 1587 nt6.27□□□□□ -1.41
VPS3P23643 YEL020CYEL020C 1683 nt6.27□□□□□ -1.41
VPS3P23643 VHT1YGR065C 1782 nt6.27□□□□□ -1.41
VPS3P23643 DON1YDR273W 1098 nt6.27□□□□□ -1.41
VPS3P23643 YGL235WYGL235W 537 nt6.27□□□□□ -1.41
VPS3P23643 MTC2YKL098W 1074 nt6.27□□□□□ -1.41
VPS3P23643 YHM2YMR241W 945 nt6.27□□□□□ -1.41
VPS3P23643 BSC4YNL269W 396 nt6.27□□□□□ -1.41
VPS3P23643 PCS60YBR222C 1632 nt6.27□□□□□ -1.41
VPS3P23643 HST3YOR025W 1344 nt6.26□□□□□ -1.41
VPS3P23643 TRP5YGL026C 2124 nt6.26□□□□□ -1.41
VPS3P23643 DUG1YFR044C 1446 nt6.26□□□□□ -1.41
VPS3P23643 DUS4YLR405W 1104 nt6.26□□□□□ -1.41
VPS3P23643 RDL2YOR286W 450 nt6.26□□□□□ -1.41
VPS3P23643 ATG12YBR217W 561 nt6.26□□□□□ -1.41
VPS3P23643 COR1YBL045C 1374 nt6.26□□□□□ -1.41
VPS3P23643 YTP1YNL237W 1380 nt6.26□□□□□ -1.41
VPS3P23643 CSC1YLR241W 2349 nt6.25□□□□□ -1.41
VPS3P23643 YDL022C-AYDL022C-A 249 nt6.25□□□□□ -1.41
VPS3P23643 YML6YML025C 861 nt6.25□□□□□ -1.41
VPS3P23643 CRP1YHR146W 1398 nt6.25□□□□□ -1.41
VPS3P23643 KTR5YNL029C 1569 nt6.25□□□□□ -1.41
VPS3P23643 RGD1YBR260C 2001 nt6.25□□□□□ -1.41
VPS3P23643 SNO4YMR322C 714 nt6.24□□□□□ -1.41
VPS3P23643 AAD15YOL165C 432 nt6.24□□□□□ -1.41
VPS3P23643 HSP33YOR391C 714 nt6.24□□□□□ -1.41
VPS3P23643 HSP32YPL280W 714 nt6.24□□□□□ -1.41
VPS3P23643 GLN1YPR035W 1113 nt6.24□□□□□ -1.41
VPS3P23643 MRK1YDL079C 1506 nt6.24□□□□□ -1.41
VPS3P23643 PUF3YLL013C 2640 nt6.23□□□□□ -1.41
VPS3P23643 GPI11YDR302W 660 nt6.23□□□□□ -1.41
VPS3P23643 RPN11YFR004W 921 nt6.23□□□□□ -1.41
VPS3P23643 YIL077CYIL077C 963 nt6.23□□□□□ -1.41
VPS3P23643 YMR119W-AYMR119W-A 375 nt6.23□□□□□ -1.41
VPS3P23643 BUD9YGR041W 1644 nt6.23□□□□□ -1.41
VPS3P23643 RSA4YCR072C 1548 nt6.23□□□□□ -1.41
VPS3P23643 AFG1YEL052W 1530 nt6.23□□□□□ -1.41
VPS3P23643 GPB2YAL056W 2643 nt6.23□□□□□ -1.41
VPS3P23643 GUD1YDL238C 1470 nt6.22□□□□□ -1.41
VPS3P23643 RSC30YHR056C 2652 nt6.22□□□□□ -1.41
VPS3P23643 VPS61YDR136C 573 nt6.22□□□□□ -1.41
VPS3P23643 CBP4YGR174C 513 nt6.22□□□□□ -1.41
VPS3P23643 MOD5YOR274W 1287 nt6.22□□□□□ -1.41
VPS3P23643 SUB2YDL084W 1341 nt6.22□□□□□ -1.41
VPS3P23643 CDC19YAL038W 1503 nt6.21□□□□□ -1.42
VPS3P23643 COX9YDL067C 180 nt6.21□□□□□ -1.42
VPS3P23643 YDL119CYDL119C 924 nt6.21□□□□□ -1.42
VPS3P23643 tR(ACG)DtR(ACG)D 73 nt6.21□□□□□ -1.42
VPS3P23643 tR(ACG)EtR(ACG)E 73 nt6.21□□□□□ -1.42
VPS3P23643 tR(ACG)KtR(ACG)K 73 nt6.21□□□□□ -1.42
VPS3P23643 tR(ACG)LtR(ACG)L 73 nt6.21□□□□□ -1.42
VPS3P23643 tR(ACG)OtR(ACG)O 73 nt6.21□□□□□ -1.42
VPS3P23643 UBC11YOR339C 471 nt6.21□□□□□ -1.42
VPS3P23643 KEL1YHR158C 3495 nt6.21□□□□□ -1.42
VPS3P23643 ATG4YNL223W 1485 nt6.21□□□□□ -1.42
VPS3P23643 COA1YIL157C 594 nt6.2□□□□□ -1.42
VPS3P23643 ASN1YPR145W 1719 nt6.19□□□□□ -1.42
VPS3P23643 KKQ8YKL168C 2175 nt6.19□□□□□ -1.42
VPS3P23643 YDR278CYDR278C 318 nt6.19□□□□□ -1.42
VPS3P23643 RPT3YDR394W 1287 nt6.19□□□□□ -1.42
VPS3P23643 YIR042CYIR042C 711 nt6.19□□□□□ -1.42
VPS3P23643 RPE1YJL121C 717 nt6.19□□□□□ -1.42
VPS3P23643 OAC1YKL120W 975 nt6.19□□□□□ -1.42
VPS3P23643 MRPS12YNR036C 462 nt6.19□□□□□ -1.42
VPS3P23643 DAP1YPL170W 459 nt6.19□□□□□ -1.42
VPS3P23643 TFB4YPR056W 1017 nt6.19□□□□□ -1.42
VPS3P23643 CHL4YDR254W 1377 nt6.18□□□□□ -1.42
VPS3P23643 PAP2YOL115W 1755 nt6.18□□□□□ -1.42
VPS3P23643 IME2YJL106W 1938 nt6.17□□□□□ -1.42
VPS3P23643 SOH1YGL127C 384 nt6.17□□□□□ -1.42
VPS3P23643 SSP120YLR250W 705 nt6.17□□□□□ -1.42
VPS3P23643 YDL023CYDL023C 321 nt6.16□□□□□ -1.42
VPS3P23643 MDH3YDL078C 1032 nt6.16□□□□□ -1.42
VPS3P23643 RPR2YIR015W 435 nt6.16□□□□□ -1.42
VPS3P23643 YBR144CYBR144C 315 nt6.16□□□□□ -1.42
VPS3P23643 RMD9YGL107C 1941 nt6.16□□□□□ -1.42
VPS3P23643 RSC2YLR357W 2670 nt6.16□□□□□ -1.42
VPS3P23643 BRL1YHR036W 1416 nt6.16□□□□□ -1.42
VPS3P23643 YDR514CYDR514C 1452 nt6.15□□□□□ -1.42
VPS3P23643 MRPL1YDR116C 858 nt6.15□□□□□ -1.42
VPS3P23643 PHB1YGR132C 864 nt6.15□□□□□ -1.42
VPS3P23643 SUP19tS(UGA)E 82 nt6.15□□□□□ -1.42
VPS3P23643 SUP17tS(UGA)I 82 nt6.15□□□□□ -1.42
VPS3P23643 SUP16tS(UGA)P 82 nt6.15□□□□□ -1.42
VPS3P23643 RPL10YLR075W 666 nt6.15□□□□□ -1.42
VPS3P23643 TFC6YDR362C 2019 nt6.15□□□□□ -1.43
VPS3P23643 MRPL22YNL177C 930 nt6.14□□□□□ -1.43
VPS3P23643 TKL1YPR074C 2043 nt6.14□□□□□ -1.43
VPS3P23643 ESC8YOL017W 2145 nt6.14□□□□□ -1.43
VPS3P23643 SNU71YGR013W 1863 nt6.13□□□□□ -1.43
VPS3P23643 RHB1YCR027C 630 nt6.13□□□□□ -1.43
VPS3P23643 SKN1YGR143W 2316 nt6.13□□□□□ -1.43
VPS3P23643 SAC6YDR129C 1929 nt6.12□□□□□ -1.43
VPS3P23643 FRS2YFL022C 1512 nt6.12□□□□□ -1.43
VPS3P23643 TEL2YGR099W 2067 nt6.12□□□□□ -1.43
VPS3P23643 ICT1YLR099C 1185 nt6.12□□□□□ -1.43
VPS3P23643 IDP3YNL009W 1263 nt6.12□□□□□ -1.43
VPS3P23643 TEP1YNL128W 1305 nt6.12□□□□□ -1.43
VPS3P23643 CWC27YPL064C 906 nt6.12□□□□□ -1.43
VPS3P23643 RPN7YPR108W 1290 nt6.12□□□□□ -1.43
Retrieved 100 of 7,029 protein–RNA pairs in 63.3 ms