Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RAB3BP20337 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.83■□□□□ 0.92
RAB3BP20337 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.83■□□□□ 0.92
RAB3BP20337 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
RAB3BP20337 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAB3BP20337 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAB3BP20337 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAB3BP20337 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.83■□□□□ 0.92
RAB3BP20337 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAB3BP20337 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAB3BP20337 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB3BP20337 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RAB3BP20337 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.82■□□□□ 0.92
RAB3BP20337 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAB3BP20337 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.82■□□□□ 0.92
RAB3BP20337 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RAB3BP20337 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB3BP20337 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAB3BP20337 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.81■□□□□ 0.92
RAB3BP20337 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB3BP20337 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB3BP20337 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RAB3BP20337 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.8■□□□□ 0.92
RAB3BP20337 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.8■□□□□ 0.92
RAB3BP20337 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB3BP20337 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.8■□□□□ 0.92
RAB3BP20337 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB3BP20337 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB3BP20337 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB3BP20337 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB3BP20337 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB3BP20337 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB3BP20337 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB3BP20337 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.79■□□□□ 0.92
RAB3BP20337 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAB3BP20337 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
RAB3BP20337 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB3BP20337 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB3BP20337 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAB3BP20337 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3BP20337 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3BP20337 SLC6A10P-202ENST00000431994 2058 ntBASIC20.77■□□□□ 0.92
RAB3BP20337 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3BP20337 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3BP20337 AC141586.4-201ENST00000624558 1573 ntBASIC20.77■□□□□ 0.92
RAB3BP20337 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
RAB3BP20337 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.77■□□□□ 0.92
RAB3BP20337 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3BP20337 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3BP20337 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3BP20337 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3BP20337 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RAB3BP20337 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3BP20337 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RAB3BP20337 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB3BP20337 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3BP20337 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RAB3BP20337 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB3BP20337 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3BP20337 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.76■□□□□ 0.91
RAB3BP20337 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3BP20337 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3BP20337 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3BP20337 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3BP20337 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3BP20337 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.75■□□□□ 0.91
RAB3BP20337 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3BP20337 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3BP20337 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RAB3BP20337 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RAB3BP20337 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3BP20337 AP006261.1-201ENST00000584783 668 ntBASIC20.75■□□□□ 0.91
RAB3BP20337 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.75■□□□□ 0.91
RAB3BP20337 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.75■□□□□ 0.91
RAB3BP20337 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3BP20337 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3BP20337 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3BP20337 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RAB3BP20337 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RAB3BP20337 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3BP20337 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.74■□□□□ 0.91
RAB3BP20337 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RAB3BP20337 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3BP20337 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RAB3BP20337 AC087741.3-201ENST00000624270 1347 ntBASIC20.74■□□□□ 0.91
RAB3BP20337 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3BP20337 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RAB3BP20337 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB3BP20337 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.73■□□□□ 0.91
RAB3BP20337 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RAB3BP20337 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB3BP20337 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RAB3BP20337 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB3BP20337 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB3BP20337 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.72■□□□□ 0.91
RAB3BP20337 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB3BP20337 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.72■□□□□ 0.91
RAB3BP20337 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RAB3BP20337 AL359504.2-201ENST00000605506 1601 ntBASIC20.71■□□□□ 0.91
RAB3BP20337 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms