Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.41■■□□□ 1.34
NELFEP18615 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
NELFEP18615 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NELFEP18615 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.41■■□□□ 1.34
NELFEP18615 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.41■■□□□ 1.34
NELFEP18615 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
NELFEP18615 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.4■■□□□ 1.34
NELFEP18615 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.4■■□□□ 1.34
NELFEP18615 AC018755.3-202ENST00000596210 929 ntBASIC23.4■■□□□ 1.34
NELFEP18615 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
NELFEP18615 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.4■■□□□ 1.34
NELFEP18615 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.39■■□□□ 1.34
NELFEP18615 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.34
NELFEP18615 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
NELFEP18615 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.39■■□□□ 1.33
NELFEP18615 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
NELFEP18615 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.39■■□□□ 1.33
NELFEP18615 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
NELFEP18615 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
NELFEP18615 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NELFEP18615 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NELFEP18615 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.38■■□□□ 1.33
NELFEP18615 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NELFEP18615 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
NELFEP18615 RARRES2P1-201ENST00000474487 481 ntBASIC23.38■■□□□ 1.33
NELFEP18615 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NELFEP18615 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NELFEP18615 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.37■■□□□ 1.33
NELFEP18615 AC145676.1-201ENST00000514988 2004 ntBASIC23.37■■□□□ 1.33
NELFEP18615 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.37■■□□□ 1.33
NELFEP18615 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NELFEP18615 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.36■■□□□ 1.33
NELFEP18615 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.36■■□□□ 1.33
NELFEP18615 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
NELFEP18615 BHLHE23-202ENST00000612929 1109 ntBASIC23.36■■□□□ 1.33
NELFEP18615 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NELFEP18615 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NELFEP18615 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NELFEP18615 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.35■■□□□ 1.33
NELFEP18615 AC074183.2-201ENST00000623112 922 ntBASIC23.35■■□□□ 1.33
NELFEP18615 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.34■■□□□ 1.33
NELFEP18615 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
NELFEP18615 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
NELFEP18615 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NELFEP18615 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NELFEP18615 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NELFEP18615 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NELFEP18615 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NELFEP18615 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.33■■□□□ 1.33
NELFEP18615 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.33■■□□□ 1.33
NELFEP18615 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
NELFEP18615 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
NELFEP18615 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
NELFEP18615 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
NELFEP18615 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NELFEP18615 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.32■■□□□ 1.32
NELFEP18615 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.32■■□□□ 1.32
NELFEP18615 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NELFEP18615 AC139795.1-202ENST00000500444 432 ntBASIC23.32■■□□□ 1.32
NELFEP18615 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
NELFEP18615 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
NELFEP18615 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NELFEP18615 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NELFEP18615 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NELFEP18615 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NELFEP18615 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NELFEP18615 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
NELFEP18615 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NELFEP18615 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.3■■□□□ 1.32
NELFEP18615 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NELFEP18615 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.3■■□□□ 1.32
NELFEP18615 AC010980.1-201ENST00000587192 1142 ntBASIC23.3■■□□□ 1.32
NELFEP18615 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
NELFEP18615 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.29■■□□□ 1.32
NELFEP18615 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NELFEP18615 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
NELFEP18615 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
NELFEP18615 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.28■■□□□ 1.32
NELFEP18615 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.28■■□□□ 1.32
NELFEP18615 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.28■■□□□ 1.32
NELFEP18615 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.28■■□□□ 1.32
NELFEP18615 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
NELFEP18615 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
NELFEP18615 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
NELFEP18615 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.28■■□□□ 1.32
NELFEP18615 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.28■■□□□ 1.32
NELFEP18615 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NELFEP18615 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.27■■□□□ 1.32
NELFEP18615 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NELFEP18615 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NELFEP18615 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.27■■□□□ 1.32
NELFEP18615 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.27■■□□□ 1.32
NELFEP18615 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NELFEP18615 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NELFEP18615 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NELFEP18615 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
NELFEP18615 AC142472.1-201ENST00000612013 1741 ntBASIC23.26■■□□□ 1.31
NELFEP18615 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.26■■□□□ 1.31
NELFEP18615 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.26■■□□□ 1.31
NELFEP18615 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms