Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.37■□□□□ 0.69
Ccl3P10855 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccl3P10855 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl3P10855 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl3P10855 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl3P10855 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ccl3P10855 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccl3P10855 Gm21956-201ENSMUST00000179946 522 ntBASIC19.36■□□□□ 0.69
Ccl3P10855 Gm10399-202ENSMUST00000202768 748 ntBASIC19.36■□□□□ 0.69
Ccl3P10855 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccl3P10855 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccl3P10855 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl3P10855 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl3P10855 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl3P10855 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.35■□□□□ 0.69
Ccl3P10855 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl3P10855 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ccl3P10855 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl3P10855 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccl3P10855 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.34■□□□□ 0.69
Ccl3P10855 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccl3P10855 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccl3P10855 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccl3P10855 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccl3P10855 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccl3P10855 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.33■□□□□ 0.69
Ccl3P10855 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ccl3P10855 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccl3P10855 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccl3P10855 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccl3P10855 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Ccl3P10855 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccl3P10855 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccl3P10855 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ccl3P10855 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccl3P10855 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccl3P10855 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccl3P10855 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccl3P10855 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ccl3P10855 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ccl3P10855 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccl3P10855 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccl3P10855 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccl3P10855 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccl3P10855 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ccl3P10855 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccl3P10855 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccl3P10855 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.3■□□□□ 0.68
Ccl3P10855 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccl3P10855 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccl3P10855 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ccl3P10855 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccl3P10855 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Ccl3P10855 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ccl3P10855 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccl3P10855 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.29■□□□□ 0.68
Ccl3P10855 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.29■□□□□ 0.68
Ccl3P10855 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccl3P10855 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccl3P10855 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccl3P10855 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccl3P10855 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccl3P10855 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccl3P10855 Gm12922-201ENSMUST00000120626 809 ntBASIC19.28■□□□□ 0.68
Ccl3P10855 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccl3P10855 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccl3P10855 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccl3P10855 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccl3P10855 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.27■□□□□ 0.67
Ccl3P10855 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccl3P10855 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.26■□□□□ 0.67
Ccl3P10855 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Ccl3P10855 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.26■□□□□ 0.67
Ccl3P10855 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccl3P10855 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ccl3P10855 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccl3P10855 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccl3P10855 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ccl3P10855 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccl3P10855 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccl3P10855 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ccl3P10855 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccl3P10855 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccl3P10855 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccl3P10855 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccl3P10855 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccl3P10855 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.24■□□□□ 0.67
Ccl3P10855 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.24■□□□□ 0.67
Ccl3P10855 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccl3P10855 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccl3P10855 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccl3P10855 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccl3P10855 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccl3P10855 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccl3P10855 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.23■□□□□ 0.67
Ccl3P10855 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccl3P10855 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.22■□□□□ 0.67
Ccl3P10855 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccl3P10855 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccl3P10855 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms