Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 MHR1YDR296W 681 nt5.65□□□□□ -1.5
RPL40BP0CH09 MRM2YGL136C 963 nt5.65□□□□□ -1.5
RPL40BP0CH09 LDS1YAL018C 978 nt5.65□□□□□ -1.5
RPL40BP0CH09 MIA40YKL195W 1212 nt5.65□□□□□ -1.5
RPL40BP0CH09 ATP14YLR295C 375 nt5.65□□□□□ -1.5
RPL40BP0CH09 STT3YGL022W 2157 nt5.65□□□□□ -1.51
RPL40BP0CH09 NDC1YML031W 1968 nt5.64□□□□□ -1.51
RPL40BP0CH09 YDL085C-AYDL085C-A 207 nt5.64□□□□□ -1.51
RPL40BP0CH09 GPI11YDR302W 660 nt5.64□□□□□ -1.51
RPL40BP0CH09 MEH1YKR007W 555 nt5.64□□□□□ -1.51
RPL40BP0CH09 DFR1YOR236W 636 nt5.64□□□□□ -1.51
RPL40BP0CH09 ARR3YPR201W 1215 nt5.64□□□□□ -1.51
RPL40BP0CH09 LDB16YCL005W 771 nt5.64□□□□□ -1.51
RPL40BP0CH09 ARO2YGL148W 1131 nt5.63□□□□□ -1.51
RPL40BP0CH09 PXR1YGR280C 816 nt5.63□□□□□ -1.51
RPL40BP0CH09 SQT1YIR012W 1296 nt5.63□□□□□ -1.51
RPL40BP0CH09 PGU1YJR153W 1086 nt5.63□□□□□ -1.51
RPL40BP0CH09 RGD1YBR260C 2001 nt5.63□□□□□ -1.51
RPL40BP0CH09 NOB1YOR056C 1380 nt5.63□□□□□ -1.51
RPL40BP0CH09 THI2YBR240C 1353 nt5.63□□□□□ -1.51
RPL40BP0CH09 YML133CYML133C 4125 nt5.63□□□□□ -1.51
RPL40BP0CH09 YBR284WYBR284W 2394 nt5.63□□□□□ -1.51
RPL40BP0CH09 ADE17YMR120C 1779 nt5.62□□□□□ -1.51
RPL40BP0CH09 MTQ1YNL063W 945 nt5.62□□□□□ -1.51
RPL40BP0CH09 YBR016WYBR016W 387 nt5.62□□□□□ -1.51
RPL40BP0CH09 PYK2YOR347C 1521 nt5.62□□□□□ -1.51
RPL40BP0CH09 CSC1YLR241W 2349 nt5.62□□□□□ -1.51
RPL40BP0CH09 YDR034W-BYDR034W-B 156 nt5.61□□□□□ -1.51
RPL40BP0CH09 VPS61YDR136C 573 nt5.61□□□□□ -1.51
RPL40BP0CH09 AMD2YDR242W 1650 nt5.61□□□□□ -1.51
RPL40BP0CH09 COX18YGR062C 951 nt5.61□□□□□ -1.51
RPL40BP0CH09 PAN6YIL145C 930 nt5.61□□□□□ -1.51
RPL40BP0CH09 TIM54YJL054W 1437 nt5.61□□□□□ -1.51
RPL40BP0CH09 YKL151CYKL151C 1014 nt5.61□□□□□ -1.51
RPL40BP0CH09 ACS1YAL054C 2142 nt5.61□□□□□ -1.51
RPL40BP0CH09 YLR123CYLR123C 330 nt5.61□□□□□ -1.51
RPL40BP0CH09 ATG33YLR356W 594 nt5.61□□□□□ -1.51
RPL40BP0CH09 CYC8YBR112C 2901 nt5.61□□□□□ -1.51
RPL40BP0CH09 MSY1YPL097W 1479 nt5.6□□□□□ -1.51
RPL40BP0CH09 YCR047W-AYCR047W-A 207 nt5.6□□□□□ -1.51
RPL40BP0CH09 YDL034WYDL034W 345 nt5.6□□□□□ -1.51
RPL40BP0CH09 DMA1YHR115C 1251 nt5.6□□□□□ -1.51
RPL40BP0CH09 OAC1YKL120W 975 nt5.6□□□□□ -1.51
RPL40BP0CH09 ILV1YER086W 1731 nt5.6□□□□□ -1.51
RPL40BP0CH09 CCC2YDR270W 3015 nt5.59□□□□□ -1.51
RPL40BP0CH09 YDR514CYDR514C 1452 nt5.59□□□□□ -1.51
RPL40BP0CH09 YJR012CYJR012C 624 nt5.59□□□□□ -1.51
RPL40BP0CH09 YLR312CYLR312C 1197 nt5.59□□□□□ -1.51
RPL40BP0CH09 YPL250W-AYPL250W-A 288 nt5.59□□□□□ -1.51
RPL40BP0CH09 EFT2YDR385W 2529 nt5.58□□□□□ -1.52
RPL40BP0CH09 EFT1YOR133W 2529 nt5.58□□□□□ -1.52
RPL40BP0CH09 YPS7YDR349C 1791 nt5.58□□□□□ -1.52
RPL40BP0CH09 PFK2YMR205C 2880 nt5.58□□□□□ -1.52
RPL40BP0CH09 AFG1YEL052W 1530 nt5.58□□□□□ -1.52
RPL40BP0CH09 MTC1YJL123C 1437 nt5.57□□□□□ -1.52
RPL40BP0CH09 EMP46YLR080W 1335 nt5.57□□□□□ -1.52
RPL40BP0CH09 LAG2YOL025W 1983 nt5.57□□□□□ -1.52
RPL40BP0CH09 MRPL1YDR116C 858 nt5.57□□□□□ -1.52
RPL40BP0CH09 PRO3YER023W 861 nt5.57□□□□□ -1.52
RPL40BP0CH09 RKI1YOR095C 777 nt5.57□□□□□ -1.52
RPL40BP0CH09 RSA4YCR072C 1548 nt5.57□□□□□ -1.52
RPL40BP0CH09 PUS7YOR243C 2031 nt5.57□□□□□ -1.52
RPL40BP0CH09 KTR5YNL029C 1569 nt5.56□□□□□ -1.52
RPL40BP0CH09 AIM24YJR080C 1185 nt5.56□□□□□ -1.52
RPL40BP0CH09 YNL120CYNL120C 486 nt5.56□□□□□ -1.52
RPL40BP0CH09 DAL82YNL314W 768 nt5.56□□□□□ -1.52
RPL40BP0CH09 MRPS16YPL013C 366 nt5.56□□□□□ -1.52
RPL40BP0CH09 KEL1YHR158C 3495 nt5.56□□□□□ -1.52
RPL40BP0CH09 SAC6YDR129C 1929 nt5.55□□□□□ -1.52
RPL40BP0CH09 ICT1YLR099C 1185 nt5.55□□□□□ -1.52
RPL40BP0CH09 NMD5YJR132W 3147 nt5.55□□□□□ -1.52
RPL40BP0CH09 PGM1YKL127W 1713 nt5.54□□□□□ -1.52
RPL40BP0CH09 NUD1YOR373W 2556 nt5.54□□□□□ -1.52
RPL40BP0CH09 JAC1YGL018C 555 nt5.54□□□□□ -1.52
RPL40BP0CH09 MIM2YLR099W-A 264 nt5.54□□□□□ -1.52
RPL40BP0CH09 ARA2YMR041C 1008 nt5.54□□□□□ -1.52
RPL40BP0CH09 RMD9YGL107C 1941 nt5.54□□□□□ -1.52
RPL40BP0CH09 MCH1YDL054C 1461 nt5.53□□□□□ -1.52
RPL40BP0CH09 ESC8YOL017W 2145 nt5.53□□□□□ -1.52
RPL40BP0CH09 VPS70YJR126C 2436 nt5.53□□□□□ -1.52
RPL40BP0CH09 YAP1801YHR161C 1914 nt5.53□□□□□ -1.52
RPL40BP0CH09 CDC34YDR054C 888 nt5.53□□□□□ -1.52
RPL40BP0CH09 YDR133CYDR133C 336 nt5.53□□□□□ -1.52
RPL40BP0CH09 SLO1YER180C-A 258 nt5.53□□□□□ -1.52
RPL40BP0CH09 YGR176WYGR176W 348 nt5.53□□□□□ -1.52
RPL40BP0CH09 BSC4YNL269W 396 nt5.53□□□□□ -1.52
RPL40BP0CH09 RRS1YOR294W 612 nt5.53□□□□□ -1.52
RPL40BP0CH09 STB5YHR178W 2232 nt5.53□□□□□ -1.52
RPL40BP0CH09 POP1YNL221C 2628 nt5.53□□□□□ -1.52
RPL40BP0CH09 WTM1YOR230W 1314 nt5.52□□□□□ -1.53
RPL40BP0CH09 RPT6YGL048C 1218 nt5.52□□□□□ -1.53
RPL40BP0CH09 UBC11YOR339C 471 nt5.52□□□□□ -1.53
RPL40BP0CH09 SAM4YPL273W 978 nt5.52□□□□□ -1.53
RPL40BP0CH09 OAZ1YPL052W 879 nt5.51□□□□□ -1.53
RPL40BP0CH09 HAS1YMR290C 1518 nt5.51□□□□□ -1.53
RPL40BP0CH09 MDM31YHR194W 1740 nt5.51□□□□□ -1.53
RPL40BP0CH09 YPL277CYPL277C 1464 nt5.51□□□□□ -1.53
RPL40BP0CH09 YHR214WYHR214W 612 nt5.5□□□□□ -1.53
RPL40BP0CH09 YAR066WYAR066W 612 nt5.5□□□□□ -1.53
RPL40BP0CH09 YOR318CYOR318C 306 nt5.5□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 23.4 ms