Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rc3h2P0C090 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.07■■□□□ 1.12
Rc3h2P0C090 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.07■■□□□ 1.12
Rc3h2P0C090 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.07■■□□□ 1.12
Rc3h2P0C090 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rc3h2P0C090 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Rc3h2P0C090 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rc3h2P0C090 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rc3h2P0C090 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Rc3h2P0C090 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rc3h2P0C090 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rc3h2P0C090 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rc3h2P0C090 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rc3h2P0C090 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Rc3h2P0C090 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.05■■□□□ 1.12
Rc3h2P0C090 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rc3h2P0C090 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rc3h2P0C090 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.05■■□□□ 1.12
Rc3h2P0C090 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.04■■□□□ 1.12
Rc3h2P0C090 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.04■■□□□ 1.12
Rc3h2P0C090 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.04■■□□□ 1.12
Rc3h2P0C090 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rc3h2P0C090 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rc3h2P0C090 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rc3h2P0C090 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.03■■□□□ 1.12
Rc3h2P0C090 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.03■■□□□ 1.12
Rc3h2P0C090 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Rc3h2P0C090 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
Rc3h2P0C090 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.02■■□□□ 1.12
Rc3h2P0C090 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rc3h2P0C090 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rc3h2P0C090 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Rc3h2P0C090 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.01■■□□□ 1.11
Rc3h2P0C090 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rc3h2P0C090 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Rc3h2P0C090 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rc3h2P0C090 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rc3h2P0C090 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22■■□□□ 1.11
Rc3h2P0C090 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rc3h2P0C090 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22■■□□□ 1.11
Rc3h2P0C090 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rc3h2P0C090 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Rc3h2P0C090 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rc3h2P0C090 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rc3h2P0C090 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.99■■□□□ 1.11
Rc3h2P0C090 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rc3h2P0C090 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rc3h2P0C090 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rc3h2P0C090 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rc3h2P0C090 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.98■■□□□ 1.11
Rc3h2P0C090 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rc3h2P0C090 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rc3h2P0C090 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rc3h2P0C090 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Rc3h2P0C090 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rc3h2P0C090 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.97■■□□□ 1.11
Rc3h2P0C090 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.97■■□□□ 1.11
Rc3h2P0C090 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.97■■□□□ 1.11
Rc3h2P0C090 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Rc3h2P0C090 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
Rc3h2P0C090 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rc3h2P0C090 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.96■■□□□ 1.11
Rc3h2P0C090 Gm7417-201ENSMUST00000192950 473 ntBASIC21.96■■□□□ 1.11
Rc3h2P0C090 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rc3h2P0C090 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.96■■□□□ 1.11
Rc3h2P0C090 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Rc3h2P0C090 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rc3h2P0C090 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.96■■□□□ 1.11
Rc3h2P0C090 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rc3h2P0C090 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.95■■□□□ 1.11
Rc3h2P0C090 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Rc3h2P0C090 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rc3h2P0C090 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Rc3h2P0C090 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rc3h2P0C090 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rc3h2P0C090 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.94■■□□□ 1.1
Rc3h2P0C090 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rc3h2P0C090 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.94■■□□□ 1.1
Rc3h2P0C090 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rc3h2P0C090 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.94■■□□□ 1.1
Rc3h2P0C090 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.94■■□□□ 1.1
Rc3h2P0C090 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.93■■□□□ 1.1
Rc3h2P0C090 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.93■■□□□ 1.1
Rc3h2P0C090 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Rc3h2P0C090 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rc3h2P0C090 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.93■■□□□ 1.1
Rc3h2P0C090 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rc3h2P0C090 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rc3h2P0C090 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rc3h2P0C090 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rc3h2P0C090 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rc3h2P0C090 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rc3h2P0C090 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rc3h2P0C090 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rc3h2P0C090 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.91■■□□□ 1.1
Rc3h2P0C090 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.91■■□□□ 1.1
Rc3h2P0C090 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rc3h2P0C090 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Rc3h2P0C090 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rc3h2P0C090 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 173.1 ms