Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC32.16■■■□□ 2.74
NclP09405 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
NclP09405 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
NclP09405 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
NclP09405 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
NclP09405 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC32.15■■■□□ 2.74
NclP09405 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
NclP09405 Nsd1-206ENSMUST00000224918 1001 ntBASIC32.14■■■□□ 2.74
NclP09405 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
NclP09405 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
NclP09405 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC32.13■■■□□ 2.73
NclP09405 Etf1-202ENSMUST00000180351 108 ntBASIC32.13■■■□□ 2.73
NclP09405 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
NclP09405 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
NclP09405 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
NclP09405 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC32.12■■■□□ 2.73
NclP09405 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
NclP09405 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
NclP09405 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
NclP09405 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC32.12■■■□□ 2.73
NclP09405 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC32.11■■■□□ 2.73
NclP09405 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
NclP09405 Gm6934-201ENSMUST00000194780 1905 ntBASIC32.11■■■□□ 2.73
NclP09405 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC32.11■■■□□ 2.73
NclP09405 Il17rd-202ENSMUST00000223942 2186 ntBASIC32.11■■■□□ 2.73
NclP09405 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
NclP09405 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
NclP09405 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC32.1■■■□□ 2.73
NclP09405 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
NclP09405 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC32.1■■■□□ 2.73
NclP09405 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
NclP09405 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
NclP09405 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC32.08■■■□□ 2.73
NclP09405 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC32.08■■■□□ 2.73
NclP09405 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
NclP09405 Gm5131-201ENSMUST00000212776 1238 ntBASIC32.07■■■□□ 2.72
NclP09405 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC32.07■■■□□ 2.72
NclP09405 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
NclP09405 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC32.07■■■□□ 2.72
NclP09405 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
NclP09405 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
NclP09405 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC32.06■■■□□ 2.72
NclP09405 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
NclP09405 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
NclP09405 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
NclP09405 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
NclP09405 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
NclP09405 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC32.04■■■□□ 2.72
NclP09405 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC32.04■■■□□ 2.72
NclP09405 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
NclP09405 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
NclP09405 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
NclP09405 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
NclP09405 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
NclP09405 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC32.03■■■□□ 2.72
NclP09405 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC32.03■■■□□ 2.72
NclP09405 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC32.03■■■□□ 2.72
NclP09405 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC32.03■■■□□ 2.72
NclP09405 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
NclP09405 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
NclP09405 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC32.02■■■□□ 2.72
NclP09405 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
NclP09405 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
NclP09405 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
NclP09405 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
NclP09405 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
NclP09405 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
NclP09405 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
NclP09405 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC32.01■■■□□ 2.71
NclP09405 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC32.01■■■□□ 2.71
NclP09405 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC32■■■□□ 2.71
NclP09405 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC32■■■□□ 2.71
NclP09405 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
NclP09405 Gm11847-201ENSMUST00000125165 1119 ntBASIC31.99■■■□□ 2.71
NclP09405 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC31.99■■■□□ 2.71
NclP09405 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC31.99■■■□□ 2.71
NclP09405 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC31.99■■■□□ 2.71
NclP09405 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
NclP09405 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
NclP09405 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
NclP09405 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
NclP09405 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
NclP09405 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC31.98■■■□□ 2.71
NclP09405 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
NclP09405 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC31.97■■■□□ 2.71
NclP09405 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
NclP09405 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC31.96■■■□□ 2.71
NclP09405 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC31.96■■■□□ 2.71
NclP09405 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
NclP09405 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
NclP09405 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
NclP09405 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
NclP09405 H3f3aos-201ENSMUST00000097448 2905 ntBASIC31.96■■■□□ 2.71
NclP09405 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
NclP09405 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
NclP09405 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC31.95■■■□□ 2.71
NclP09405 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
NclP09405 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
NclP09405 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
NclP09405 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms