Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a2P08122 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a2P08122 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a2P08122 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a2P08122 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a2P08122 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a2P08122 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.61■□□□□ 0.89
Col4a2P08122 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Col4a2P08122 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.6■□□□□ 0.89
Col4a2P08122 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a2P08122 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Col4a2P08122 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a2P08122 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a2P08122 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a2P08122 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a2P08122 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a2P08122 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a2P08122 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a2P08122 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a2P08122 Gm22238-201ENSMUST00000175222 88 ntBASIC20.59■□□□□ 0.89
Col4a2P08122 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a2P08122 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a2P08122 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.58■□□□□ 0.89
Col4a2P08122 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Col4a2P08122 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col4a2P08122 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Col4a2P08122 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Col4a2P08122 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col4a2P08122 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Col4a2P08122 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.57■□□□□ 0.88
Col4a2P08122 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.57■□□□□ 0.88
Col4a2P08122 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a2P08122 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a2P08122 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a2P08122 Gm7417-201ENSMUST00000192950 473 ntBASIC20.56■□□□□ 0.88
Col4a2P08122 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a2P08122 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a2P08122 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a2P08122 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a2P08122 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Col4a2P08122 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Col4a2P08122 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Col4a2P08122 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a2P08122 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a2P08122 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a2P08122 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col4a2P08122 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col4a2P08122 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.54■□□□□ 0.88
Col4a2P08122 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.54■□□□□ 0.88
Col4a2P08122 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Col4a2P08122 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a2P08122 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.53■□□□□ 0.88
Col4a2P08122 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a2P08122 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Col4a2P08122 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a2P08122 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a2P08122 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.53■□□□□ 0.88
Col4a2P08122 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Col4a2P08122 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a2P08122 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Col4a2P08122 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a2P08122 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a2P08122 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.52■□□□□ 0.88
Col4a2P08122 Gm40881-201ENSMUST00000223397 166 ntBASIC20.52■□□□□ 0.88
Col4a2P08122 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a2P08122 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a2P08122 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a2P08122 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.51■□□□□ 0.87
Col4a2P08122 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a2P08122 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a2P08122 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a2P08122 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a2P08122 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a2P08122 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.5■□□□□ 0.87
Col4a2P08122 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col4a2P08122 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col4a2P08122 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col4a2P08122 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col4a2P08122 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.5■□□□□ 0.87
Col4a2P08122 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
Col4a2P08122 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a2P08122 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.49■□□□□ 0.87
Col4a2P08122 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a2P08122 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a2P08122 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a2P08122 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Col4a2P08122 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.48■□□□□ 0.87
Col4a2P08122 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a2P08122 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a2P08122 Gm12922-201ENSMUST00000120626 809 ntBASIC20.47■□□□□ 0.87
Col4a2P08122 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.47■□□□□ 0.87
Col4a2P08122 Gm9847-201ENSMUST00000052528 599 ntBASIC20.47■□□□□ 0.87
Col4a2P08122 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Col4a2P08122 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.47■□□□□ 0.87
Col4a2P08122 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col4a2P08122 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Col4a2P08122 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col4a2P08122 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col4a2P08122 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.47■□□□□ 0.87
Col4a2P08122 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms