Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.01■□□□□ 0.47
Cd74P04441 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cd74P04441 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Cd74P04441 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cd74P04441 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cd74P04441 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cd74P04441 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18■□□□□ 0.47
Cd74P04441 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cd74P04441 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cd74P04441 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cd74P04441 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cd74P04441 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cd74P04441 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cd74P04441 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cd74P04441 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cd74P04441 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cd74P04441 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cd74P04441 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cd74P04441 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cd74P04441 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd74P04441 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd74P04441 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.97■□□□□ 0.47
Cd74P04441 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.97■□□□□ 0.47
Cd74P04441 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd74P04441 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd74P04441 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Cd74P04441 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.96■□□□□ 0.47
Cd74P04441 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cd74P04441 Gm5921-201ENSMUST00000075898 882 ntBASIC17.96■□□□□ 0.47
Cd74P04441 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd74P04441 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd74P04441 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.96■□□□□ 0.47
Cd74P04441 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cd74P04441 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd74P04441 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd74P04441 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cd74P04441 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd74P04441 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cd74P04441 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cd74P04441 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.95■□□□□ 0.46
Cd74P04441 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.95■□□□□ 0.46
Cd74P04441 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd74P04441 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd74P04441 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd74P04441 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd74P04441 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd74P04441 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd74P04441 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.94■□□□□ 0.46
Cd74P04441 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd74P04441 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd74P04441 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd74P04441 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd74P04441 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cd74P04441 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cd74P04441 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cd74P04441 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cd74P04441 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd74P04441 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd74P04441 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Cd74P04441 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd74P04441 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd74P04441 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cd74P04441 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cd74P04441 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cd74P04441 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
Cd74P04441 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cd74P04441 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.91■□□□□ 0.46
Cd74P04441 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cd74P04441 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cd74P04441 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cd74P04441 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cd74P04441 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cd74P04441 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cd74P04441 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cd74P04441 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cd74P04441 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cd74P04441 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
Cd74P04441 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.9■□□□□ 0.46
Cd74P04441 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.9■□□□□ 0.46
Cd74P04441 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cd74P04441 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.89■□□□□ 0.45
Cd74P04441 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cd74P04441 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cd74P04441 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cd74P04441 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cd74P04441 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cd74P04441 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cd74P04441 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cd74P04441 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.88■□□□□ 0.45
Cd74P04441 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cd74P04441 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cd74P04441 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.88■□□□□ 0.45
Cd74P04441 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cd74P04441 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cd74P04441 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cd74P04441 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cd74P04441 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cd74P04441 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
Cd74P04441 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cd74P04441 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms