Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
P01643 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01643 Etf1-202ENSMUST00000180351 108 ntBASIC17.22■□□□□ 0.35
P01643 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.22■□□□□ 0.35
P01643 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
P01643 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01643 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01643 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01643 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01643 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01643 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01643 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P01643 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.21■□□□□ 0.35
P01643 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01643 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01643 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.21■□□□□ 0.35
P01643 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.21■□□□□ 0.35
P01643 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01643 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
P01643 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
P01643 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01643 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01643 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
P01643 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.2■□□□□ 0.34
P01643 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
P01643 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.2■□□□□ 0.34
P01643 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
P01643 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P01643 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P01643 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
P01643 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P01643 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.19■□□□□ 0.34
P01643 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P01643 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
P01643 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.18■□□□□ 0.34
P01643 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P01643 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.18■□□□□ 0.34
P01643 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
P01643 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.18■□□□□ 0.34
P01643 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P01643 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P01643 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P01643 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
P01643 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P01643 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
P01643 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
P01643 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
P01643 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.17■□□□□ 0.34
P01643 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.17■□□□□ 0.34
P01643 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P01643 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01643 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01643 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01643 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P01643 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01643 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.16■□□□□ 0.34
P01643 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01643 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.16■□□□□ 0.34
P01643 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P01643 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01643 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P01643 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01643 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01643 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01643 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.15■□□□□ 0.34
P01643 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
P01643 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01643 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.14■□□□□ 0.33
P01643 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
P01643 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
P01643 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01643 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01643 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.14■□□□□ 0.33
P01643 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01643 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01643 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P01643 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.13■□□□□ 0.33
P01643 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.13■□□□□ 0.33
P01643 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.13■□□□□ 0.33
P01643 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01643 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P01643 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01643 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01643 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.12■□□□□ 0.33
P01643 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
P01643 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
P01643 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
P01643 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P01643 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01643 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
P01643 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
P01643 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P01643 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
P01643 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01643 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.11■□□□□ 0.33
P01643 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01643 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01643 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
P01643 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01643 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms