Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.13■□□□□ 0.97
CNOT4O95628 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT4O95628 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CNOT4O95628 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.12■□□□□ 0.97
CNOT4O95628 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CNOT4O95628 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.12■□□□□ 0.97
CNOT4O95628 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CNOT4O95628 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNOT4O95628 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.11■□□□□ 0.97
CNOT4O95628 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CNOT4O95628 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.11■□□□□ 0.97
CNOT4O95628 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNOT4O95628 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNOT4O95628 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNOT4O95628 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.11■□□□□ 0.97
CNOT4O95628 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNOT4O95628 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.1■□□□□ 0.97
CNOT4O95628 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.1■□□□□ 0.97
CNOT4O95628 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNOT4O95628 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNOT4O95628 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.1■□□□□ 0.97
CNOT4O95628 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CNOT4O95628 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT4O95628 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT4O95628 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT4O95628 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.09■□□□□ 0.97
CNOT4O95628 LONRF2P2-201ENST00000439212 571 ntBASIC21.09■□□□□ 0.97
CNOT4O95628 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.09■□□□□ 0.97
CNOT4O95628 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT4O95628 AL451085.2-201ENST00000605085 799 ntBASIC21.09■□□□□ 0.97
CNOT4O95628 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT4O95628 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.09■□□□□ 0.97
CNOT4O95628 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT4O95628 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT4O95628 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNOT4O95628 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNOT4O95628 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.08■□□□□ 0.97
CNOT4O95628 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNOT4O95628 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNOT4O95628 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNOT4O95628 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNOT4O95628 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNOT4O95628 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.08■□□□□ 0.97
CNOT4O95628 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT4O95628 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT4O95628 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT4O95628 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.07■□□□□ 0.96
CNOT4O95628 AC010980.1-201ENST00000587192 1142 ntBASIC21.07■□□□□ 0.96
CNOT4O95628 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.07■□□□□ 0.96
CNOT4O95628 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT4O95628 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.07■□□□□ 0.96
CNOT4O95628 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT4O95628 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.07■□□□□ 0.96
CNOT4O95628 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.06■□□□□ 0.96
CNOT4O95628 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT4O95628 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT4O95628 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.06■□□□□ 0.96
CNOT4O95628 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.06■□□□□ 0.96
CNOT4O95628 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.06■□□□□ 0.96
CNOT4O95628 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT4O95628 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT4O95628 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT4O95628 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT4O95628 AC022616.5-201ENST00000518796 181 ntBASIC21.05■□□□□ 0.96
CNOT4O95628 MIR4508-201ENST00000584178 70 ntBASIC21.05■□□□□ 0.96
CNOT4O95628 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT4O95628 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT4O95628 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.04■□□□□ 0.96
CNOT4O95628 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT4O95628 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.03■□□□□ 0.96
CNOT4O95628 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT4O95628 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.03■□□□□ 0.96
CNOT4O95628 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT4O95628 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT4O95628 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT4O95628 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.02■□□□□ 0.96
CNOT4O95628 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.02■□□□□ 0.96
CNOT4O95628 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT4O95628 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT4O95628 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT4O95628 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT4O95628 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.02■□□□□ 0.96
CNOT4O95628 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CNOT4O95628 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CNOT4O95628 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT4O95628 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CNOT4O95628 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CNOT4O95628 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT4O95628 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CNOT4O95628 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT4O95628 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.01■□□□□ 0.95
CNOT4O95628 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.01■□□□□ 0.95
CNOT4O95628 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT4O95628 YBX1P4-201ENST00000392794 808 ntBASIC21.01■□□□□ 0.95
CNOT4O95628 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.01■□□□□ 0.95
CNOT4O95628 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT4O95628 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CNOT4O95628 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.01■□□□□ 0.95
CNOT4O95628 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT4O95628 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms