Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cops3O88543 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.27■□□□□ 0.68
Cops3O88543 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cops3O88543 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Cops3O88543 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cops3O88543 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cops3O88543 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
Cops3O88543 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cops3O88543 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cops3O88543 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cops3O88543 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops3O88543 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops3O88543 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cops3O88543 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops3O88543 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops3O88543 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.25■□□□□ 0.67
Cops3O88543 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops3O88543 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops3O88543 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cops3O88543 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cops3O88543 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.24■□□□□ 0.67
Cops3O88543 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cops3O88543 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cops3O88543 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cops3O88543 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cops3O88543 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cops3O88543 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cops3O88543 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops3O88543 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Cops3O88543 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops3O88543 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.23■□□□□ 0.67
Cops3O88543 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops3O88543 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.23■□□□□ 0.67
Cops3O88543 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops3O88543 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops3O88543 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops3O88543 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cops3O88543 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cops3O88543 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cops3O88543 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cops3O88543 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cops3O88543 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.22■□□□□ 0.67
Cops3O88543 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cops3O88543 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
Cops3O88543 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cops3O88543 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cops3O88543 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cops3O88543 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cops3O88543 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cops3O88543 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.2■□□□□ 0.66
Cops3O88543 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.2■□□□□ 0.66
Cops3O88543 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cops3O88543 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cops3O88543 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cops3O88543 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cops3O88543 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cops3O88543 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Cops3O88543 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cops3O88543 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cops3O88543 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cops3O88543 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cops3O88543 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cops3O88543 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cops3O88543 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cops3O88543 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Cops3O88543 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cops3O88543 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cops3O88543 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cops3O88543 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.16■□□□□ 0.66
Cops3O88543 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops3O88543 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops3O88543 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops3O88543 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cops3O88543 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops3O88543 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.16■□□□□ 0.66
Cops3O88543 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops3O88543 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cops3O88543 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops3O88543 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops3O88543 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops3O88543 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.15■□□□□ 0.66
Cops3O88543 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops3O88543 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops3O88543 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops3O88543 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cops3O88543 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Cops3O88543 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cops3O88543 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cops3O88543 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.14■□□□□ 0.65
Cops3O88543 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cops3O88543 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cops3O88543 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.14■□□□□ 0.65
Cops3O88543 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cops3O88543 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.14■□□□□ 0.65
Cops3O88543 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cops3O88543 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Cops3O88543 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cops3O88543 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cops3O88543 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cops3O88543 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms