Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Tspan6O70401 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tspan6O70401 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tspan6O70401 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tspan6O70401 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.2■□□□□ 0.98
Tspan6O70401 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Tspan6O70401 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tspan6O70401 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.2■□□□□ 0.98
Tspan6O70401 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tspan6O70401 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.2■□□□□ 0.98
Tspan6O70401 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tspan6O70401 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.2■□□□□ 0.98
Tspan6O70401 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tspan6O70401 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tspan6O70401 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tspan6O70401 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tspan6O70401 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Tspan6O70401 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tspan6O70401 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tspan6O70401 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tspan6O70401 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tspan6O70401 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.17■□□□□ 0.98
Tspan6O70401 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tspan6O70401 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tspan6O70401 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tspan6O70401 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tspan6O70401 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tspan6O70401 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tspan6O70401 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.16■□□□□ 0.98
Tspan6O70401 Gm40881-201ENSMUST00000223397 166 ntBASIC21.16■□□□□ 0.98
Tspan6O70401 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tspan6O70401 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tspan6O70401 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Tspan6O70401 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Tspan6O70401 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Tspan6O70401 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tspan6O70401 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tspan6O70401 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tspan6O70401 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tspan6O70401 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tspan6O70401 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tspan6O70401 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tspan6O70401 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tspan6O70401 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.13■□□□□ 0.97
Tspan6O70401 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tspan6O70401 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.13■□□□□ 0.97
Tspan6O70401 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.13■□□□□ 0.97
Tspan6O70401 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.13■□□□□ 0.97
Tspan6O70401 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Tspan6O70401 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.13■□□□□ 0.97
Tspan6O70401 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tspan6O70401 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tspan6O70401 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Tspan6O70401 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.12■□□□□ 0.97
Tspan6O70401 Gm10399-202ENSMUST00000202768 748 ntBASIC21.12■□□□□ 0.97
Tspan6O70401 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Tspan6O70401 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tspan6O70401 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.12■□□□□ 0.97
Tspan6O70401 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tspan6O70401 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tspan6O70401 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tspan6O70401 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tspan6O70401 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.1■□□□□ 0.97
Tspan6O70401 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tspan6O70401 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tspan6O70401 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tspan6O70401 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.09■□□□□ 0.97
Tspan6O70401 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tspan6O70401 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Tspan6O70401 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tspan6O70401 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tspan6O70401 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tspan6O70401 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tspan6O70401 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tspan6O70401 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tspan6O70401 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.07■□□□□ 0.96
Tspan6O70401 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tspan6O70401 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tspan6O70401 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.07■□□□□ 0.96
Tspan6O70401 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.07■□□□□ 0.96
Tspan6O70401 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tspan6O70401 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tspan6O70401 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tspan6O70401 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tspan6O70401 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tspan6O70401 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Tspan6O70401 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tspan6O70401 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.06■□□□□ 0.96
Tspan6O70401 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tspan6O70401 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.05■□□□□ 0.96
Tspan6O70401 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tspan6O70401 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tspan6O70401 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tspan6O70401 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tspan6O70401 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tspan6O70401 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.04■□□□□ 0.96
Tspan6O70401 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tspan6O70401 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tspan6O70401 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tspan6O70401 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms