Protein–RNA interactions for Protein: O14994

SYN3, Synapsin-3, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3O14994 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
SYN3O14994 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SYN3O14994 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.5■■□□□ 1.67
SYN3O14994 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.49■■□□□ 1.67
SYN3O14994 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.49■■□□□ 1.67
SYN3O14994 KRT18P24-201ENST00000344739 1156 ntBASIC25.49■■□□□ 1.67
SYN3O14994 GUSBP5-201ENST00000418136 578 ntBASIC25.49■■□□□ 1.67
SYN3O14994 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.49■■□□□ 1.67
SYN3O14994 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.49■■□□□ 1.67
SYN3O14994 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SYN3O14994 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SYN3O14994 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.48■■□□□ 1.67
SYN3O14994 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SYN3O14994 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SYN3O14994 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SYN3O14994 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.48■■□□□ 1.67
SYN3O14994 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
SYN3O14994 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.47■■□□□ 1.67
SYN3O14994 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.47■■□□□ 1.67
SYN3O14994 Z92544.1-202ENST00000571933 1220 ntBASIC25.47■■□□□ 1.67
SYN3O14994 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.46■■□□□ 1.67
SYN3O14994 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
SYN3O14994 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SYN3O14994 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.46■■□□□ 1.67
SYN3O14994 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.45■■□□□ 1.67
SYN3O14994 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.45■■□□□ 1.66
SYN3O14994 AL592295.1-201ENST00000400984 884 ntBASIC25.45■■□□□ 1.66
SYN3O14994 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.45■■□□□ 1.66
SYN3O14994 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.45■■□□□ 1.66
SYN3O14994 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
SYN3O14994 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
SYN3O14994 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.44■■□□□ 1.66
SYN3O14994 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
SYN3O14994 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.43■■□□□ 1.66
SYN3O14994 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
SYN3O14994 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SYN3O14994 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SYN3O14994 THA1P-201ENST00000590384 1145 ntBASIC25.43■■□□□ 1.66
SYN3O14994 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SYN3O14994 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SYN3O14994 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SYN3O14994 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SYN3O14994 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
SYN3O14994 AC239859.2-201ENST00000444165 318 ntBASIC25.42■■□□□ 1.66
SYN3O14994 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SYN3O14994 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.42■■□□□ 1.66
SYN3O14994 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.42■■□□□ 1.66
SYN3O14994 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
SYN3O14994 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SYN3O14994 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
SYN3O14994 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.41■■□□□ 1.66
SYN3O14994 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SYN3O14994 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.41■■□□□ 1.66
SYN3O14994 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.41■■□□□ 1.66
SYN3O14994 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.41■■□□□ 1.66
SYN3O14994 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.41■■□□□ 1.66
SYN3O14994 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.41■■□□□ 1.66
SYN3O14994 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SYN3O14994 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.4■■□□□ 1.66
SYN3O14994 AC120024.1-201ENST00000562672 995 ntBASIC25.4■■□□□ 1.66
SYN3O14994 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
SYN3O14994 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
SYN3O14994 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.66
SYN3O14994 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.39■■□□□ 1.66
SYN3O14994 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SYN3O14994 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SYN3O14994 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SYN3O14994 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
SYN3O14994 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SYN3O14994 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SYN3O14994 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SYN3O14994 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
SYN3O14994 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.37■■□□□ 1.65
SYN3O14994 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
SYN3O14994 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SYN3O14994 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SYN3O14994 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SYN3O14994 BX664725.1-201ENST00000438252 379 ntBASIC25.37■■□□□ 1.65
SYN3O14994 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.37■■□□□ 1.65
SYN3O14994 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SYN3O14994 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
SYN3O14994 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.36■■□□□ 1.65
SYN3O14994 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SYN3O14994 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SYN3O14994 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
SYN3O14994 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
SYN3O14994 KRT125P-201ENST00000546827 989 ntBASIC25.35■■□□□ 1.65
SYN3O14994 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SYN3O14994 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SYN3O14994 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SYN3O14994 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
SYN3O14994 AC137630.3-201ENST00000607245 391 ntBASIC25.34■■□□□ 1.65
SYN3O14994 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
SYN3O14994 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SYN3O14994 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.33■■□□□ 1.65
SYN3O14994 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SYN3O14994 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.33■■□□□ 1.65
SYN3O14994 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.33■■□□□ 1.65
SYN3O14994 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SYN3O14994 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.33■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms