Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hps1O08983 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hps1O08983 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hps1O08983 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hps1O08983 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hps1O08983 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Hps1O08983 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Hps1O08983 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hps1O08983 Mir3960-201ENSMUST00000198213 73 ntBASIC19.77■□□□□ 0.76
Hps1O08983 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hps1O08983 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hps1O08983 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hps1O08983 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.77■□□□□ 0.76
Hps1O08983 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hps1O08983 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Hps1O08983 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hps1O08983 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hps1O08983 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.76■□□□□ 0.75
Hps1O08983 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Hps1O08983 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hps1O08983 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.76■□□□□ 0.75
Hps1O08983 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hps1O08983 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hps1O08983 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hps1O08983 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hps1O08983 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hps1O08983 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Hps1O08983 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hps1O08983 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hps1O08983 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hps1O08983 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hps1O08983 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Hps1O08983 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hps1O08983 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hps1O08983 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hps1O08983 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hps1O08983 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hps1O08983 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hps1O08983 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hps1O08983 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.74■□□□□ 0.75
Hps1O08983 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Hps1O08983 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hps1O08983 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hps1O08983 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.74■□□□□ 0.75
Hps1O08983 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Hps1O08983 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hps1O08983 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hps1O08983 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hps1O08983 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Hps1O08983 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hps1O08983 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Hps1O08983 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hps1O08983 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.72■□□□□ 0.75
Hps1O08983 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hps1O08983 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hps1O08983 Gm27502-201ENSMUST00000183495 199 ntBASIC19.71■□□□□ 0.75
Hps1O08983 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hps1O08983 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hps1O08983 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hps1O08983 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Hps1O08983 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hps1O08983 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Hps1O08983 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hps1O08983 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hps1O08983 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hps1O08983 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hps1O08983 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hps1O08983 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Hps1O08983 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hps1O08983 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hps1O08983 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hps1O08983 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hps1O08983 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hps1O08983 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hps1O08983 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Hps1O08983 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.68■□□□□ 0.74
Hps1O08983 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hps1O08983 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hps1O08983 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hps1O08983 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hps1O08983 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hps1O08983 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
Hps1O08983 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hps1O08983 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hps1O08983 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hps1O08983 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.67■□□□□ 0.74
Hps1O08983 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Hps1O08983 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.67■□□□□ 0.74
Hps1O08983 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hps1O08983 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hps1O08983 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hps1O08983 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.66■□□□□ 0.74
Hps1O08983 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hps1O08983 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hps1O08983 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hps1O08983 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hps1O08983 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hps1O08983 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hps1O08983 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hps1O08983 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms