Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3727J3QM54 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3727J3QM54 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3727J3QM54 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.35■□□□□ 0.53
Gm3727J3QM54 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3727J3QM54 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.34■□□□□ 0.53
Gm3727J3QM54 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3727J3QM54 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3727J3QM54 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.34■□□□□ 0.53
Gm3727J3QM54 Gm37136-201ENSMUST00000194368 194 ntBASIC18.34■□□□□ 0.53
Gm3727J3QM54 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.34■□□□□ 0.53
Gm3727J3QM54 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3727J3QM54 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Gm3727J3QM54 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm3727J3QM54 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm3727J3QM54 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.33■□□□□ 0.52
Gm3727J3QM54 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Gm3727J3QM54 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm3727J3QM54 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm3727J3QM54 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm3727J3QM54 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Gm3727J3QM54 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3727J3QM54 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Gm3727J3QM54 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3727J3QM54 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3727J3QM54 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3727J3QM54 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.32■□□□□ 0.52
Gm3727J3QM54 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3727J3QM54 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3727J3QM54 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3727J3QM54 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3727J3QM54 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3727J3QM54 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3727J3QM54 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Gm3727J3QM54 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3727J3QM54 Gm22567-201ENSMUST00000175542 342 ntBASIC18.31■□□□□ 0.52
Gm3727J3QM54 Gm9397-201ENSMUST00000200125 605 ntBASIC18.31■□□□□ 0.52
Gm3727J3QM54 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3727J3QM54 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Gm3727J3QM54 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3727J3QM54 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Gm3727J3QM54 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3727J3QM54 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3727J3QM54 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3727J3QM54 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3727J3QM54 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3727J3QM54 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3727J3QM54 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3727J3QM54 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3727J3QM54 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3727J3QM54 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3727J3QM54 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3727J3QM54 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Gm3727J3QM54 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.28■□□□□ 0.52
Gm3727J3QM54 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3727J3QM54 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3727J3QM54 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3727J3QM54 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3727J3QM54 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.27■□□□□ 0.52
Gm3727J3QM54 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3727J3QM54 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3727J3QM54 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.26■□□□□ 0.51
Gm3727J3QM54 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3727J3QM54 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3727J3QM54 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Gm3727J3QM54 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Gm3727J3QM54 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3727J3QM54 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3727J3QM54 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3727J3QM54 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3727J3QM54 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.24■□□□□ 0.51
Gm3727J3QM54 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3727J3QM54 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3727J3QM54 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.24■□□□□ 0.51
Gm3727J3QM54 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3727J3QM54 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3727J3QM54 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Gm3727J3QM54 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3727J3QM54 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3727J3QM54 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3727J3QM54 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3727J3QM54 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Gm3727J3QM54 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3727J3QM54 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3727J3QM54 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3727J3QM54 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3727J3QM54 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3727J3QM54 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3727J3QM54 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3727J3QM54 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Gm3727J3QM54 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3727J3QM54 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Gm3727J3QM54 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3727J3QM54 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3727J3QM54 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3727J3QM54 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3727J3QM54 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3727J3QM54 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Gm3727J3QM54 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm3727J3QM54 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms