Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Colca2F8VPY8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
Colca2F8VPY8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Colca2F8VPY8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.08■□□□□ 0.96
Colca2F8VPY8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.07■□□□□ 0.96
Colca2F8VPY8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Colca2F8VPY8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Colca2F8VPY8 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.07■□□□□ 0.96
Colca2F8VPY8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Colca2F8VPY8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.06■□□□□ 0.96
Colca2F8VPY8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Colca2F8VPY8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Colca2F8VPY8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Colca2F8VPY8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Colca2F8VPY8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Colca2F8VPY8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.06■□□□□ 0.96
Colca2F8VPY8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Colca2F8VPY8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Colca2F8VPY8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.05■□□□□ 0.96
Colca2F8VPY8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.05■□□□□ 0.96
Colca2F8VPY8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.05■□□□□ 0.96
Colca2F8VPY8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Colca2F8VPY8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.05■□□□□ 0.96
Colca2F8VPY8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Colca2F8VPY8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Colca2F8VPY8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Colca2F8VPY8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Colca2F8VPY8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Colca2F8VPY8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Colca2F8VPY8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Colca2F8VPY8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Colca2F8VPY8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Colca2F8VPY8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.03■□□□□ 0.96
Colca2F8VPY8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Colca2F8VPY8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Colca2F8VPY8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.03■□□□□ 0.96
Colca2F8VPY8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.03■□□□□ 0.96
Colca2F8VPY8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Colca2F8VPY8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
Colca2F8VPY8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Colca2F8VPY8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.01■□□□□ 0.95
Colca2F8VPY8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Colca2F8VPY8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Colca2F8VPY8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Colca2F8VPY8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Colca2F8VPY8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Colca2F8VPY8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Colca2F8VPY8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.99■□□□□ 0.95
Colca2F8VPY8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.99■□□□□ 0.95
Colca2F8VPY8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Colca2F8VPY8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Colca2F8VPY8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Colca2F8VPY8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Colca2F8VPY8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Colca2F8VPY8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Colca2F8VPY8 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.98■□□□□ 0.95
Colca2F8VPY8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Colca2F8VPY8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Colca2F8VPY8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.97■□□□□ 0.95
Colca2F8VPY8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Colca2F8VPY8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Colca2F8VPY8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.97■□□□□ 0.95
Colca2F8VPY8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Colca2F8VPY8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Colca2F8VPY8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Colca2F8VPY8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Colca2F8VPY8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Colca2F8VPY8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.96■□□□□ 0.95
Colca2F8VPY8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Colca2F8VPY8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Colca2F8VPY8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Colca2F8VPY8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Colca2F8VPY8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Colca2F8VPY8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.95■□□□□ 0.94
Colca2F8VPY8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Colca2F8VPY8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Colca2F8VPY8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Colca2F8VPY8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Colca2F8VPY8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Colca2F8VPY8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Colca2F8VPY8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.93■□□□□ 0.94
Colca2F8VPY8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.93■□□□□ 0.94
Colca2F8VPY8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Colca2F8VPY8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Colca2F8VPY8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Colca2F8VPY8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Colca2F8VPY8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Colca2F8VPY8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Colca2F8VPY8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.92■□□□□ 0.94
Colca2F8VPY8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.92■□□□□ 0.94
Colca2F8VPY8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Colca2F8VPY8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Colca2F8VPY8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Colca2F8VPY8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Colca2F8VPY8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Colca2F8VPY8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Colca2F8VPY8 Gm8495-201ENSMUST00000188740 694 ntBASIC20.91■□□□□ 0.94
Colca2F8VPY8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Colca2F8VPY8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Colca2F8VPY8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms