Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ptchd4B9EKX1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ptchd4B9EKX1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ptchd4B9EKX1 Gm7417-201ENSMUST00000192950 473 ntBASIC23.47■■□□□ 1.35
Ptchd4B9EKX1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ptchd4B9EKX1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ptchd4B9EKX1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC23.46■■□□□ 1.35
Ptchd4B9EKX1 Gm11847-201ENSMUST00000125165 1119 ntBASIC23.46■■□□□ 1.35
Ptchd4B9EKX1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC23.46■■□□□ 1.35
Ptchd4B9EKX1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ptchd4B9EKX1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ptchd4B9EKX1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.46■■□□□ 1.35
Ptchd4B9EKX1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ptchd4B9EKX1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC23.46■■□□□ 1.35
Ptchd4B9EKX1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Ptchd4B9EKX1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.45■■□□□ 1.35
Ptchd4B9EKX1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ptchd4B9EKX1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ptchd4B9EKX1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.44■■□□□ 1.34
Ptchd4B9EKX1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.44■■□□□ 1.34
Ptchd4B9EKX1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.44■■□□□ 1.34
Ptchd4B9EKX1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ptchd4B9EKX1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ptchd4B9EKX1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ptchd4B9EKX1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ptchd4B9EKX1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ptchd4B9EKX1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ptchd4B9EKX1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ptchd4B9EKX1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.43■■□□□ 1.34
Ptchd4B9EKX1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Ptchd4B9EKX1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ptchd4B9EKX1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.42■■□□□ 1.34
Ptchd4B9EKX1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.42■■□□□ 1.34
Ptchd4B9EKX1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ptchd4B9EKX1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Ptchd4B9EKX1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ptchd4B9EKX1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ptchd4B9EKX1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.41■■□□□ 1.34
Ptchd4B9EKX1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ptchd4B9EKX1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ptchd4B9EKX1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ptchd4B9EKX1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC23.4■■□□□ 1.34
Ptchd4B9EKX1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC23.4■■□□□ 1.34
Ptchd4B9EKX1 Gm40881-201ENSMUST00000223397 166 ntBASIC23.4■■□□□ 1.34
Ptchd4B9EKX1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.4■■□□□ 1.34
Ptchd4B9EKX1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Ptchd4B9EKX1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ptchd4B9EKX1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ptchd4B9EKX1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ptchd4B9EKX1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ptchd4B9EKX1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Ptchd4B9EKX1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Ptchd4B9EKX1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ptchd4B9EKX1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC23.38■■□□□ 1.33
Ptchd4B9EKX1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ptchd4B9EKX1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ptchd4B9EKX1 Gm8093-201ENSMUST00000128935 1892 ntBASIC23.38■■□□□ 1.33
Ptchd4B9EKX1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ptchd4B9EKX1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ptchd4B9EKX1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ptchd4B9EKX1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ptchd4B9EKX1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Ptchd4B9EKX1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ptchd4B9EKX1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ptchd4B9EKX1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ptchd4B9EKX1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Ptchd4B9EKX1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
Ptchd4B9EKX1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.36■■□□□ 1.33
Ptchd4B9EKX1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ptchd4B9EKX1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ptchd4B9EKX1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC23.35■■□□□ 1.33
Ptchd4B9EKX1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Ptchd4B9EKX1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Ptchd4B9EKX1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC23.35■■□□□ 1.33
Ptchd4B9EKX1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC23.35■■□□□ 1.33
Ptchd4B9EKX1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ptchd4B9EKX1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Ptchd4B9EKX1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ptchd4B9EKX1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ptchd4B9EKX1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ptchd4B9EKX1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ptchd4B9EKX1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ptchd4B9EKX1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ptchd4B9EKX1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ptchd4B9EKX1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ptchd4B9EKX1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ptchd4B9EKX1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Ptchd4B9EKX1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ptchd4B9EKX1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ptchd4B9EKX1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ptchd4B9EKX1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ptchd4B9EKX1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ptchd4B9EKX1 Gm10399-202ENSMUST00000202768 748 ntBASIC23.32■■□□□ 1.32
Ptchd4B9EKX1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ptchd4B9EKX1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ptchd4B9EKX1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ptchd4B9EKX1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ptchd4B9EKX1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ptchd4B9EKX1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ptchd4B9EKX1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC23.32■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms