Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
TBC1D3BA6NDS4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TBC1D3BA6NDS4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TBC1D3BA6NDS4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TBC1D3BA6NDS4 BX664725.1-201ENST00000438252 379 ntBASIC24.43■■□□□ 1.5
TBC1D3BA6NDS4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
TBC1D3BA6NDS4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TBC1D3BA6NDS4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TBC1D3BA6NDS4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TBC1D3BA6NDS4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
TBC1D3BA6NDS4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
TBC1D3BA6NDS4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.42■■□□□ 1.5
TBC1D3BA6NDS4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TBC1D3BA6NDS4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TBC1D3BA6NDS4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
TBC1D3BA6NDS4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
TBC1D3BA6NDS4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.41■■□□□ 1.5
TBC1D3BA6NDS4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
TBC1D3BA6NDS4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TBC1D3BA6NDS4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
TBC1D3BA6NDS4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
TBC1D3BA6NDS4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
TBC1D3BA6NDS4 MIR4787-201ENST00000607364 84 ntBASIC24.4■■□□□ 1.5
TBC1D3BA6NDS4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
TBC1D3BA6NDS4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.4■■□□□ 1.5
TBC1D3BA6NDS4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TBC1D3BA6NDS4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
TBC1D3BA6NDS4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TBC1D3BA6NDS4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TBC1D3BA6NDS4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
TBC1D3BA6NDS4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
TBC1D3BA6NDS4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.39■■□□□ 1.49
TBC1D3BA6NDS4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TBC1D3BA6NDS4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.39■■□□□ 1.49
TBC1D3BA6NDS4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TBC1D3BA6NDS4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.38■■□□□ 1.49
TBC1D3BA6NDS4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TBC1D3BA6NDS4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TBC1D3BA6NDS4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.38■■□□□ 1.49
TBC1D3BA6NDS4 AC120024.1-201ENST00000562672 995 ntBASIC24.38■■□□□ 1.49
TBC1D3BA6NDS4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.38■■□□□ 1.49
TBC1D3BA6NDS4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.38■■□□□ 1.49
TBC1D3BA6NDS4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
TBC1D3BA6NDS4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
TBC1D3BA6NDS4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TBC1D3BA6NDS4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TBC1D3BA6NDS4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
TBC1D3BA6NDS4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.37■■□□□ 1.49
TBC1D3BA6NDS4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TBC1D3BA6NDS4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
TBC1D3BA6NDS4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.37■■□□□ 1.49
TBC1D3BA6NDS4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.37■■□□□ 1.49
TBC1D3BA6NDS4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TBC1D3BA6NDS4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
TBC1D3BA6NDS4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.36■■□□□ 1.49
TBC1D3BA6NDS4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TBC1D3BA6NDS4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TBC1D3BA6NDS4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.36■■□□□ 1.49
TBC1D3BA6NDS4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.35■■□□□ 1.49
TBC1D3BA6NDS4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.35■■□□□ 1.49
TBC1D3BA6NDS4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
TBC1D3BA6NDS4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TBC1D3BA6NDS4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TBC1D3BA6NDS4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
TBC1D3BA6NDS4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.34■■□□□ 1.49
TBC1D3BA6NDS4 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.34■■□□□ 1.49
TBC1D3BA6NDS4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
TBC1D3BA6NDS4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.34■■□□□ 1.49
TBC1D3BA6NDS4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.34■■□□□ 1.49
TBC1D3BA6NDS4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.33■■□□□ 1.49
TBC1D3BA6NDS4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TBC1D3BA6NDS4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TBC1D3BA6NDS4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
TBC1D3BA6NDS4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TBC1D3BA6NDS4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.33■■□□□ 1.49
TBC1D3BA6NDS4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.33■■□□□ 1.49
TBC1D3BA6NDS4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.33■■□□□ 1.49
TBC1D3BA6NDS4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
TBC1D3BA6NDS4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.32■■□□□ 1.48
TBC1D3BA6NDS4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.32■■□□□ 1.48
TBC1D3BA6NDS4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
TBC1D3BA6NDS4 AC137630.3-201ENST00000607245 391 ntBASIC24.32■■□□□ 1.48
TBC1D3BA6NDS4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.32■■□□□ 1.48
TBC1D3BA6NDS4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TBC1D3BA6NDS4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TBC1D3BA6NDS4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.32■■□□□ 1.48
TBC1D3BA6NDS4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TBC1D3BA6NDS4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.31■■□□□ 1.48
TBC1D3BA6NDS4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.31■■□□□ 1.48
TBC1D3BA6NDS4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
TBC1D3BA6NDS4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TBC1D3BA6NDS4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
TBC1D3BA6NDS4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
TBC1D3BA6NDS4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
TBC1D3BA6NDS4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TBC1D3BA6NDS4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TBC1D3BA6NDS4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TBC1D3BA6NDS4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.29■■□□□ 1.48
TBC1D3BA6NDS4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TBC1D3BA6NDS4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms