Protein–RNA interactions for Protein: A4QN01

LINC01553, Putative uncharacterized protein encoded by LINC01553, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01553A4QN01 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
LINC01553A4QN01 MIR6724-1-201ENST00000616420 92 ntBASIC25.8■■□□□ 1.72
LINC01553A4QN01 MIR6724-2-201ENST00000616483 92 ntBASIC25.8■■□□□ 1.72
LINC01553A4QN01 MIR6724-4-201ENST00000617390 92 ntBASIC25.8■■□□□ 1.72
LINC01553A4QN01 MIR6724-3-201ENST00000622482 92 ntBASIC25.8■■□□□ 1.72
LINC01553A4QN01 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
LINC01553A4QN01 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
LINC01553A4QN01 AC096631.2-201ENST00000436136 790 ntBASIC25.79■■□□□ 1.72
LINC01553A4QN01 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.79■■□□□ 1.72
LINC01553A4QN01 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.79■■□□□ 1.72
LINC01553A4QN01 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
LINC01553A4QN01 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
LINC01553A4QN01 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.79■■□□□ 1.72
LINC01553A4QN01 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.79■■□□□ 1.72
LINC01553A4QN01 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.78■■□□□ 1.72
LINC01553A4QN01 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
LINC01553A4QN01 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.78■■□□□ 1.72
LINC01553A4QN01 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.78■■□□□ 1.72
LINC01553A4QN01 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
LINC01553A4QN01 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
LINC01553A4QN01 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LINC01553A4QN01 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.77■■□□□ 1.72
LINC01553A4QN01 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
LINC01553A4QN01 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LINC01553A4QN01 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.76■■□□□ 1.71
LINC01553A4QN01 MTDHP2-201ENST00000601468 714 ntBASIC25.76■■□□□ 1.71
LINC01553A4QN01 MIR4466-201ENST00000606121 54 ntBASIC25.76■■□□□ 1.71
LINC01553A4QN01 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.76■■□□□ 1.71
LINC01553A4QN01 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
LINC01553A4QN01 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
LINC01553A4QN01 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.75■■□□□ 1.71
LINC01553A4QN01 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LINC01553A4QN01 AL356740.2-201ENST00000601559 647 ntBASIC25.75■■□□□ 1.71
LINC01553A4QN01 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
LINC01553A4QN01 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
LINC01553A4QN01 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
LINC01553A4QN01 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
LINC01553A4QN01 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.74■■□□□ 1.71
LINC01553A4QN01 ABCB10P1-201ENST00000614297 2181 ntBASIC25.74■■□□□ 1.71
LINC01553A4QN01 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
LINC01553A4QN01 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
LINC01553A4QN01 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
LINC01553A4QN01 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.73■■□□□ 1.71
LINC01553A4QN01 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
LINC01553A4QN01 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
LINC01553A4QN01 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.72■■□□□ 1.71
LINC01553A4QN01 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.72■■□□□ 1.71
LINC01553A4QN01 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LINC01553A4QN01 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.72■■□□□ 1.71
LINC01553A4QN01 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.71■■□□□ 1.71
LINC01553A4QN01 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
LINC01553A4QN01 BX255925.1-201ENST00000566954 1854 ntBASIC25.71■■□□□ 1.71
LINC01553A4QN01 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.71■■□□□ 1.71
LINC01553A4QN01 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.71■■□□□ 1.71
LINC01553A4QN01 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
LINC01553A4QN01 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
LINC01553A4QN01 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
LINC01553A4QN01 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.7■■□□□ 1.71
LINC01553A4QN01 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.7■■□□□ 1.7
LINC01553A4QN01 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.7■■□□□ 1.7
LINC01553A4QN01 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.7■■□□□ 1.7
LINC01553A4QN01 AC133561.4-201ENST00000566112 224 ntBASIC25.7■■□□□ 1.7
LINC01553A4QN01 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
LINC01553A4QN01 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
LINC01553A4QN01 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
LINC01553A4QN01 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
LINC01553A4QN01 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.69■■□□□ 1.7
LINC01553A4QN01 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.69■■□□□ 1.7
LINC01553A4QN01 AL512631.2-201ENST00000604634 923 ntBASIC25.69■■□□□ 1.7
LINC01553A4QN01 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
LINC01553A4QN01 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
LINC01553A4QN01 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
LINC01553A4QN01 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.68■■□□□ 1.7
LINC01553A4QN01 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.68■■□□□ 1.7
LINC01553A4QN01 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.68■■□□□ 1.7
LINC01553A4QN01 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.68■■□□□ 1.7
LINC01553A4QN01 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.68■■□□□ 1.7
LINC01553A4QN01 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LINC01553A4QN01 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.67■■□□□ 1.7
LINC01553A4QN01 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
LINC01553A4QN01 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.67■■□□□ 1.7
LINC01553A4QN01 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
LINC01553A4QN01 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.66■■□□□ 1.7
LINC01553A4QN01 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LINC01553A4QN01 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.66■■□□□ 1.7
LINC01553A4QN01 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LINC01553A4QN01 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
LINC01553A4QN01 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LINC01553A4QN01 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.65■■□□□ 1.7
LINC01553A4QN01 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.65■■□□□ 1.7
LINC01553A4QN01 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.65■■□□□ 1.7
LINC01553A4QN01 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.65■■□□□ 1.7
LINC01553A4QN01 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LINC01553A4QN01 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
LINC01553A4QN01 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
LINC01553A4QN01 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
LINC01553A4QN01 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
LINC01553A4QN01 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
LINC01553A4QN01 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.64■■□□□ 1.7
LINC01553A4QN01 AC011551.1-201ENST00000614101 683 ntBASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms