Protein–RNA interactions for Protein: A2AF28

Slc25a53, MCG115034, isoform CRA_c, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc25a53A2AF28 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc25a53A2AF28 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc25a53A2AF28 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Slc25a53A2AF28 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc25a53A2AF28 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc25a53A2AF28 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc25a53A2AF28 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.3■□□□□ 0.68
Slc25a53A2AF28 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc25a53A2AF28 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc25a53A2AF28 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc25a53A2AF28 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc25a53A2AF28 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.29■□□□□ 0.68
Slc25a53A2AF28 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slc25a53A2AF28 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc25a53A2AF28 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc25a53A2AF28 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.29■□□□□ 0.68
Slc25a53A2AF28 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slc25a53A2AF28 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.29■□□□□ 0.68
Slc25a53A2AF28 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc25a53A2AF28 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc25a53A2AF28 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc25a53A2AF28 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.28■□□□□ 0.68
Slc25a53A2AF28 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc25a53A2AF28 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc25a53A2AF28 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc25a53A2AF28 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.27■□□□□ 0.68
Slc25a53A2AF28 Gm45102-201ENSMUST00000207427 857 ntBASIC19.27■□□□□ 0.68
Slc25a53A2AF28 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.27■□□□□ 0.68
Slc25a53A2AF28 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc25a53A2AF28 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Slc25a53A2AF28 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Slc25a53A2AF28 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc25a53A2AF28 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc25a53A2AF28 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc25a53A2AF28 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc25a53A2AF28 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc25a53A2AF28 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.25■□□□□ 0.67
Slc25a53A2AF28 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc25a53A2AF28 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slc25a53A2AF28 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.25■□□□□ 0.67
Slc25a53A2AF28 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.25■□□□□ 0.67
Slc25a53A2AF28 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc25a53A2AF28 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Slc25a53A2AF28 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc25a53A2AF28 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc25a53A2AF28 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc25a53A2AF28 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Slc25a53A2AF28 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.23■□□□□ 0.67
Slc25a53A2AF28 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Slc25a53A2AF28 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Slc25a53A2AF28 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc25a53A2AF28 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Slc25a53A2AF28 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.23■□□□□ 0.67
Slc25a53A2AF28 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc25a53A2AF28 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slc25a53A2AF28 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc25a53A2AF28 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc25a53A2AF28 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc25a53A2AF28 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Slc25a53A2AF28 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc25a53A2AF28 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc25a53A2AF28 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc25a53A2AF28 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.21■□□□□ 0.67
Slc25a53A2AF28 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.21■□□□□ 0.67
Slc25a53A2AF28 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc25a53A2AF28 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc25a53A2AF28 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Slc25a53A2AF28 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc25a53A2AF28 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Slc25a53A2AF28 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Slc25a53A2AF28 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc25a53A2AF28 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.2■□□□□ 0.66
Slc25a53A2AF28 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc25a53A2AF28 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc25a53A2AF28 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc25a53A2AF28 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc25a53A2AF28 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc25a53A2AF28 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc25a53A2AF28 Gm9959-201ENSMUST00000068277 390 ntBASIC19.19■□□□□ 0.66
Slc25a53A2AF28 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Slc25a53A2AF28 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc25a53A2AF28 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc25a53A2AF28 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc25a53A2AF28 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.19■□□□□ 0.66
Slc25a53A2AF28 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slc25a53A2AF28 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Slc25a53A2AF28 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.18■□□□□ 0.66
Slc25a53A2AF28 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.18■□□□□ 0.66
Slc25a53A2AF28 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc25a53A2AF28 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Slc25a53A2AF28 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc25a53A2AF28 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc25a53A2AF28 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slc25a53A2AF28 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.17■□□□□ 0.66
Slc25a53A2AF28 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Slc25a53A2AF28 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc25a53A2AF28 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.16■□□□□ 0.66
Slc25a53A2AF28 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.16■□□□□ 0.66
Slc25a53A2AF28 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc25a53A2AF28 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms