Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV7-9A0A0J9YWB2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV7-9A0A0J9YWB2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.72■□□□□ 0.43
TRBV7-9A0A0J9YWB2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV7-9A0A0J9YWB2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV7-9A0A0J9YWB2 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.72■□□□□ 0.43
TRBV7-9A0A0J9YWB2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV7-9A0A0J9YWB2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.71■□□□□ 0.43
TRBV7-9A0A0J9YWB2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV7-9A0A0J9YWB2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV7-9A0A0J9YWB2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV7-9A0A0J9YWB2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV7-9A0A0J9YWB2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV7-9A0A0J9YWB2 AC025884.2-201ENST00000553429 711 ntBASIC17.71■□□□□ 0.43
TRBV7-9A0A0J9YWB2 MIR3960-201ENST00000583311 91 ntBASIC17.71■□□□□ 0.43
TRBV7-9A0A0J9YWB2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV7-9A0A0J9YWB2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV7-9A0A0J9YWB2 AL139125.2-201ENST00000623134 1869 ntBASIC17.71■□□□□ 0.43
TRBV7-9A0A0J9YWB2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC17.7■□□□□ 0.42
TRBV7-9A0A0J9YWB2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV7-9A0A0J9YWB2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.7■□□□□ 0.42
TRBV7-9A0A0J9YWB2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV7-9A0A0J9YWB2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV7-9A0A0J9YWB2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV7-9A0A0J9YWB2 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV7-9A0A0J9YWB2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV7-9A0A0J9YWB2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV7-9A0A0J9YWB2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV7-9A0A0J9YWB2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
TRBV7-9A0A0J9YWB2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRBV7-9A0A0J9YWB2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV7-9A0A0J9YWB2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV7-9A0A0J9YWB2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV7-9A0A0J9YWB2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV7-9A0A0J9YWB2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.69■□□□□ 0.42
TRBV7-9A0A0J9YWB2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.69■□□□□ 0.42
TRBV7-9A0A0J9YWB2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV7-9A0A0J9YWB2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV7-9A0A0J9YWB2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV7-9A0A0J9YWB2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV7-9A0A0J9YWB2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRBV7-9A0A0J9YWB2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV7-9A0A0J9YWB2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV7-9A0A0J9YWB2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TRBV7-9A0A0J9YWB2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TRBV7-9A0A0J9YWB2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.68■□□□□ 0.42
TRBV7-9A0A0J9YWB2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
TRBV7-9A0A0J9YWB2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TRBV7-9A0A0J9YWB2 AC016575.1-201ENST00000607026 382 ntBASIC17.68■□□□□ 0.42
TRBV7-9A0A0J9YWB2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.68■□□□□ 0.42
TRBV7-9A0A0J9YWB2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV7-9A0A0J9YWB2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV7-9A0A0J9YWB2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.68■□□□□ 0.42
TRBV7-9A0A0J9YWB2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV7-9A0A0J9YWB2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.68■□□□□ 0.42
TRBV7-9A0A0J9YWB2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV7-9A0A0J9YWB2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV7-9A0A0J9YWB2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV7-9A0A0J9YWB2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV7-9A0A0J9YWB2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV7-9A0A0J9YWB2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRBV7-9A0A0J9YWB2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV7-9A0A0J9YWB2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV7-9A0A0J9YWB2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV7-9A0A0J9YWB2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV7-9A0A0J9YWB2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV7-9A0A0J9YWB2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV7-9A0A0J9YWB2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV7-9A0A0J9YWB2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV7-9A0A0J9YWB2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV7-9A0A0J9YWB2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV7-9A0A0J9YWB2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBV7-9A0A0J9YWB2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBV7-9A0A0J9YWB2 AL157400.5-201ENST00000507624 621 ntBASIC17.66■□□□□ 0.42
TRBV7-9A0A0J9YWB2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV7-9A0A0J9YWB2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.66■□□□□ 0.42
TRBV7-9A0A0J9YWB2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV7-9A0A0J9YWB2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV7-9A0A0J9YWB2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV7-9A0A0J9YWB2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV7-9A0A0J9YWB2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRBV7-9A0A0J9YWB2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBV7-9A0A0J9YWB2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV7-9A0A0J9YWB2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV7-9A0A0J9YWB2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBV7-9A0A0J9YWB2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV7-9A0A0J9YWB2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV7-9A0A0J9YWB2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRBV7-9A0A0J9YWB2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRBV7-9A0A0J9YWB2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
TRBV7-9A0A0J9YWB2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV7-9A0A0J9YWB2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV7-9A0A0J9YWB2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV7-9A0A0J9YWB2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV7-9A0A0J9YWB2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV7-9A0A0J9YWB2 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.64■□□□□ 0.41
TRBV7-9A0A0J9YWB2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV7-9A0A0J9YWB2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.64■□□□□ 0.41
TRBV7-9A0A0J9YWB2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.64■□□□□ 0.41
TRBV7-9A0A0J9YWB2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms