Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv29A0A0G2LB96 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.95■□□□□ 0.46
Trbv29A0A0G2LB96 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.94■□□□□ 0.46
Trbv29A0A0G2LB96 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv29A0A0G2LB96 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.94■□□□□ 0.46
Trbv29A0A0G2LB96 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv29A0A0G2LB96 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv29A0A0G2LB96 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv29A0A0G2LB96 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv29A0A0G2LB96 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv29A0A0G2LB96 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv29A0A0G2LB96 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv29A0A0G2LB96 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv29A0A0G2LB96 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.92■□□□□ 0.46
Trbv29A0A0G2LB96 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Trbv29A0A0G2LB96 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.92■□□□□ 0.46
Trbv29A0A0G2LB96 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.92■□□□□ 0.46
Trbv29A0A0G2LB96 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv29A0A0G2LB96 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.92■□□□□ 0.46
Trbv29A0A0G2LB96 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv29A0A0G2LB96 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv29A0A0G2LB96 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Trbv29A0A0G2LB96 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trbv29A0A0G2LB96 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv29A0A0G2LB96 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trbv29A0A0G2LB96 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv29A0A0G2LB96 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trbv29A0A0G2LB96 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.91■□□□□ 0.46
Trbv29A0A0G2LB96 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv29A0A0G2LB96 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.91■□□□□ 0.46
Trbv29A0A0G2LB96 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Trbv29A0A0G2LB96 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv29A0A0G2LB96 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv29A0A0G2LB96 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.9■□□□□ 0.46
Trbv29A0A0G2LB96 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.9■□□□□ 0.46
Trbv29A0A0G2LB96 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv29A0A0G2LB96 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trbv29A0A0G2LB96 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv29A0A0G2LB96 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Trbv29A0A0G2LB96 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trbv29A0A0G2LB96 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv29A0A0G2LB96 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv29A0A0G2LB96 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trbv29A0A0G2LB96 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv29A0A0G2LB96 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.88■□□□□ 0.45
Trbv29A0A0G2LB96 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.88■□□□□ 0.45
Trbv29A0A0G2LB96 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.88■□□□□ 0.45
Trbv29A0A0G2LB96 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv29A0A0G2LB96 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv29A0A0G2LB96 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv29A0A0G2LB96 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv29A0A0G2LB96 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.87■□□□□ 0.45
Trbv29A0A0G2LB96 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv29A0A0G2LB96 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv29A0A0G2LB96 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trbv29A0A0G2LB96 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trbv29A0A0G2LB96 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv29A0A0G2LB96 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv29A0A0G2LB96 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv29A0A0G2LB96 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv29A0A0G2LB96 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trbv29A0A0G2LB96 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Trbv29A0A0G2LB96 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trbv29A0A0G2LB96 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv29A0A0G2LB96 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trbv29A0A0G2LB96 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trbv29A0A0G2LB96 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv29A0A0G2LB96 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv29A0A0G2LB96 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv29A0A0G2LB96 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv29A0A0G2LB96 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv29A0A0G2LB96 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv29A0A0G2LB96 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trbv29A0A0G2LB96 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv29A0A0G2LB96 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv29A0A0G2LB96 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv29A0A0G2LB96 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv29A0A0G2LB96 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv29A0A0G2LB96 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trbv29A0A0G2LB96 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.84■□□□□ 0.45
Trbv29A0A0G2LB96 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv29A0A0G2LB96 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv29A0A0G2LB96 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Trbv29A0A0G2LB96 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv29A0A0G2LB96 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv29A0A0G2LB96 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.82■□□□□ 0.44
Trbv29A0A0G2LB96 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trbv29A0A0G2LB96 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trbv29A0A0G2LB96 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv29A0A0G2LB96 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv29A0A0G2LB96 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv29A0A0G2LB96 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.82■□□□□ 0.44
Trbv29A0A0G2LB96 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv29A0A0G2LB96 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv29A0A0G2LB96 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trbv29A0A0G2LB96 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trbv29A0A0G2LB96 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.81■□□□□ 0.44
Trbv29A0A0G2LB96 Gm44428-201ENSMUST00000204474 874 ntBASIC17.81■□□□□ 0.44
Trbv29A0A0G2LB96 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.81■□□□□ 0.44
Trbv29A0A0G2LB96 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms