Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV13-2A0A0B4J235 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-2A0A0B4J235 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-2A0A0B4J235 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-2A0A0B4J235 DUSP8P5-201ENST00000422884 1815 ntBASIC15.73■□□□□ 0.11
TRAV13-2A0A0B4J235 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-2A0A0B4J235 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-2A0A0B4J235 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-2A0A0B4J235 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-2A0A0B4J235 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-2A0A0B4J235 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-2A0A0B4J235 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV13-2A0A0B4J235 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
TRAV13-2A0A0B4J235 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV13-2A0A0B4J235 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV13-2A0A0B4J235 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV13-2A0A0B4J235 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV13-2A0A0B4J235 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV13-2A0A0B4J235 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV13-2A0A0B4J235 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV13-2A0A0B4J235 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV13-2A0A0B4J235 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV13-2A0A0B4J235 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV13-2A0A0B4J235 AC096887.2-201ENST00000623443 1957 ntBASIC15.72■□□□□ 0.11
TRAV13-2A0A0B4J235 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV13-2A0A0B4J235 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV13-2A0A0B4J235 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV13-2A0A0B4J235 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV13-2A0A0B4J235 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV13-2A0A0B4J235 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV13-2A0A0B4J235 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV13-2A0A0B4J235 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV13-2A0A0B4J235 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV13-2A0A0B4J235 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV13-2A0A0B4J235 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV13-2A0A0B4J235 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV13-2A0A0B4J235 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRAV13-2A0A0B4J235 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV13-2A0A0B4J235 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV13-2A0A0B4J235 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAV13-2A0A0B4J235 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV13-2A0A0B4J235 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV13-2A0A0B4J235 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV13-2A0A0B4J235 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TRAV13-2A0A0B4J235 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV13-2A0A0B4J235 CLDN5-201ENST00000403084 2357 ntBASIC15.7■□□□□ 0.1
TRAV13-2A0A0B4J235 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV13-2A0A0B4J235 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV13-2A0A0B4J235 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV13-2A0A0B4J235 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRAV13-2A0A0B4J235 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV13-2A0A0B4J235 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV13-2A0A0B4J235 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV13-2A0A0B4J235 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV13-2A0A0B4J235 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV13-2A0A0B4J235 AC141586.4-201ENST00000624558 1573 ntBASIC15.69■□□□□ 0.1
TRAV13-2A0A0B4J235 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV13-2A0A0B4J235 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV13-2A0A0B4J235 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRAV13-2A0A0B4J235 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV13-2A0A0B4J235 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV13-2A0A0B4J235 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV13-2A0A0B4J235 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV13-2A0A0B4J235 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRAV13-2A0A0B4J235 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV13-2A0A0B4J235 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV13-2A0A0B4J235 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TRAV13-2A0A0B4J235 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRAV13-2A0A0B4J235 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV13-2A0A0B4J235 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV13-2A0A0B4J235 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV13-2A0A0B4J235 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV13-2A0A0B4J235 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV13-2A0A0B4J235 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV13-2A0A0B4J235 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV13-2A0A0B4J235 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-2A0A0B4J235 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-2A0A0B4J235 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-2A0A0B4J235 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-2A0A0B4J235 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC15.67■□□□□ 0.1
TRAV13-2A0A0B4J235 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-2A0A0B4J235 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-2A0A0B4J235 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-2A0A0B4J235 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-2A0A0B4J235 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-2A0A0B4J235 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-2A0A0B4J235 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-2A0A0B4J235 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-2A0A0B4J235 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-2A0A0B4J235 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-2A0A0B4J235 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-2A0A0B4J235 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-2A0A0B4J235 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-2A0A0B4J235 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-2A0A0B4J235 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-2A0A0B4J235 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-2A0A0B4J235 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-2A0A0B4J235 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-2A0A0B4J235 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-2A0A0B4J235 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms