Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv30A0A0B4J1P1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trbv30A0A0B4J1P1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv30A0A0B4J1P1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.24■□□□□ 0.19
Trbv30A0A0B4J1P1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trbv30A0A0B4J1P1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv30A0A0B4J1P1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv30A0A0B4J1P1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trbv30A0A0B4J1P1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv30A0A0B4J1P1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv30A0A0B4J1P1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv30A0A0B4J1P1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.23■□□□□ 0.19
Trbv30A0A0B4J1P1 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.23■□□□□ 0.19
Trbv30A0A0B4J1P1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv30A0A0B4J1P1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv30A0A0B4J1P1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv30A0A0B4J1P1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv30A0A0B4J1P1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.22■□□□□ 0.19
Trbv30A0A0B4J1P1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv30A0A0B4J1P1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Trbv30A0A0B4J1P1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trbv30A0A0B4J1P1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.21■□□□□ 0.19
Trbv30A0A0B4J1P1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv30A0A0B4J1P1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv30A0A0B4J1P1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv30A0A0B4J1P1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.21■□□□□ 0.18
Trbv30A0A0B4J1P1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Trbv30A0A0B4J1P1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trbv30A0A0B4J1P1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trbv30A0A0B4J1P1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.2■□□□□ 0.18
Trbv30A0A0B4J1P1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv30A0A0B4J1P1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv30A0A0B4J1P1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv30A0A0B4J1P1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv30A0A0B4J1P1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv30A0A0B4J1P1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv30A0A0B4J1P1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trbv30A0A0B4J1P1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv30A0A0B4J1P1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.19■□□□□ 0.18
Trbv30A0A0B4J1P1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv30A0A0B4J1P1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv30A0A0B4J1P1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv30A0A0B4J1P1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv30A0A0B4J1P1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv30A0A0B4J1P1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trbv30A0A0B4J1P1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv30A0A0B4J1P1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv30A0A0B4J1P1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.17■□□□□ 0.18
Trbv30A0A0B4J1P1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv30A0A0B4J1P1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.17■□□□□ 0.18
Trbv30A0A0B4J1P1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.17■□□□□ 0.18
Trbv30A0A0B4J1P1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv30A0A0B4J1P1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trbv30A0A0B4J1P1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv30A0A0B4J1P1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv30A0A0B4J1P1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv30A0A0B4J1P1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv30A0A0B4J1P1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv30A0A0B4J1P1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trbv30A0A0B4J1P1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv30A0A0B4J1P1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv30A0A0B4J1P1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv30A0A0B4J1P1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv30A0A0B4J1P1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.15■□□□□ 0.18
Trbv30A0A0B4J1P1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv30A0A0B4J1P1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.15■□□□□ 0.18
Trbv30A0A0B4J1P1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.15■□□□□ 0.18
Trbv30A0A0B4J1P1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trbv30A0A0B4J1P1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Trbv30A0A0B4J1P1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Trbv30A0A0B4J1P1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trbv30A0A0B4J1P1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv30A0A0B4J1P1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv30A0A0B4J1P1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv30A0A0B4J1P1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv30A0A0B4J1P1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv30A0A0B4J1P1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Trbv30A0A0B4J1P1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv30A0A0B4J1P1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv30A0A0B4J1P1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.13■□□□□ 0.17
Trbv30A0A0B4J1P1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv30A0A0B4J1P1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv30A0A0B4J1P1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv30A0A0B4J1P1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv30A0A0B4J1P1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.12■□□□□ 0.17
Trbv30A0A0B4J1P1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv30A0A0B4J1P1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms