Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv30A0A0B4J1P1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trbv30A0A0B4J1P1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv30A0A0B4J1P1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.24■□□□□ 0.19
Trbv30A0A0B4J1P1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trbv30A0A0B4J1P1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv30A0A0B4J1P1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv30A0A0B4J1P1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trbv30A0A0B4J1P1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv30A0A0B4J1P1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv30A0A0B4J1P1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv30A0A0B4J1P1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.23■□□□□ 0.19
Trbv30A0A0B4J1P1 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.23■□□□□ 0.19
Trbv30A0A0B4J1P1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv30A0A0B4J1P1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv30A0A0B4J1P1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv30A0A0B4J1P1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv30A0A0B4J1P1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.22■□□□□ 0.19
Trbv30A0A0B4J1P1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv30A0A0B4J1P1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Trbv30A0A0B4J1P1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trbv30A0A0B4J1P1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.21■□□□□ 0.19
Trbv30A0A0B4J1P1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv30A0A0B4J1P1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv30A0A0B4J1P1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv30A0A0B4J1P1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.21■□□□□ 0.18
Trbv30A0A0B4J1P1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Trbv30A0A0B4J1P1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trbv30A0A0B4J1P1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trbv30A0A0B4J1P1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.2■□□□□ 0.18
Trbv30A0A0B4J1P1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv30A0A0B4J1P1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv30A0A0B4J1P1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv30A0A0B4J1P1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv30A0A0B4J1P1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv30A0A0B4J1P1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv30A0A0B4J1P1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trbv30A0A0B4J1P1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv30A0A0B4J1P1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.19■□□□□ 0.18
Trbv30A0A0B4J1P1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv30A0A0B4J1P1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv30A0A0B4J1P1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv30A0A0B4J1P1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv30A0A0B4J1P1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv30A0A0B4J1P1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trbv30A0A0B4J1P1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv30A0A0B4J1P1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv30A0A0B4J1P1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.17■□□□□ 0.18
Trbv30A0A0B4J1P1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv30A0A0B4J1P1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.17■□□□□ 0.18
Trbv30A0A0B4J1P1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.17■□□□□ 0.18
Trbv30A0A0B4J1P1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv30A0A0B4J1P1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trbv30A0A0B4J1P1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv30A0A0B4J1P1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv30A0A0B4J1P1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv30A0A0B4J1P1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv30A0A0B4J1P1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv30A0A0B4J1P1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trbv30A0A0B4J1P1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv30A0A0B4J1P1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv30A0A0B4J1P1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv30A0A0B4J1P1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv30A0A0B4J1P1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.15■□□□□ 0.18
Trbv30A0A0B4J1P1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv30A0A0B4J1P1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.15■□□□□ 0.18
Trbv30A0A0B4J1P1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.15■□□□□ 0.18
Trbv30A0A0B4J1P1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trbv30A0A0B4J1P1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Trbv30A0A0B4J1P1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Trbv30A0A0B4J1P1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trbv30A0A0B4J1P1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trbv30A0A0B4J1P1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv30A0A0B4J1P1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv30A0A0B4J1P1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv30A0A0B4J1P1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv30A0A0B4J1P1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv30A0A0B4J1P1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Trbv30A0A0B4J1P1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv30A0A0B4J1P1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv30A0A0B4J1P1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.13■□□□□ 0.17
Trbv30A0A0B4J1P1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv30A0A0B4J1P1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv30A0A0B4J1P1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv30A0A0B4J1P1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv30A0A0B4J1P1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.12■□□□□ 0.17
Trbv30A0A0B4J1P1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv30A0A0B4J1P1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms