Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv16A0A0B4J1H3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv16A0A0B4J1H3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC15.65■□□□□ 0.1
Trbv16A0A0B4J1H3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv16A0A0B4J1H3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv16A0A0B4J1H3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trbv16A0A0B4J1H3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv16A0A0B4J1H3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.65■□□□□ 0.1
Trbv16A0A0B4J1H3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC15.65■□□□□ 0.1
Trbv16A0A0B4J1H3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv16A0A0B4J1H3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv16A0A0B4J1H3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv16A0A0B4J1H3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv16A0A0B4J1H3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv16A0A0B4J1H3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv16A0A0B4J1H3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv16A0A0B4J1H3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv16A0A0B4J1H3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trbv16A0A0B4J1H3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv16A0A0B4J1H3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv16A0A0B4J1H3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv16A0A0B4J1H3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trbv16A0A0B4J1H3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv16A0A0B4J1H3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv16A0A0B4J1H3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv16A0A0B4J1H3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv16A0A0B4J1H3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv16A0A0B4J1H3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv16A0A0B4J1H3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.62■□□□□ 0.09
Trbv16A0A0B4J1H3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv16A0A0B4J1H3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC15.61■□□□□ 0.09
Trbv16A0A0B4J1H3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv16A0A0B4J1H3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trbv16A0A0B4J1H3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv16A0A0B4J1H3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv16A0A0B4J1H3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.61■□□□□ 0.09
Trbv16A0A0B4J1H3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.61■□□□□ 0.09
Trbv16A0A0B4J1H3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv16A0A0B4J1H3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv16A0A0B4J1H3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv16A0A0B4J1H3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.61■□□□□ 0.09
Trbv16A0A0B4J1H3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trbv16A0A0B4J1H3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trbv16A0A0B4J1H3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv16A0A0B4J1H3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv16A0A0B4J1H3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trbv16A0A0B4J1H3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv16A0A0B4J1H3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC15.6■□□□□ 0.09
Trbv16A0A0B4J1H3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv16A0A0B4J1H3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC15.6■□□□□ 0.09
Trbv16A0A0B4J1H3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv16A0A0B4J1H3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC15.6■□□□□ 0.09
Trbv16A0A0B4J1H3 Gm37415-201ENSMUST00000192265 2054 ntBASIC15.59■□□□□ 0.09
Trbv16A0A0B4J1H3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv16A0A0B4J1H3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trbv16A0A0B4J1H3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv16A0A0B4J1H3 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.58■□□□□ 0.09
Trbv16A0A0B4J1H3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Trbv16A0A0B4J1H3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Trbv16A0A0B4J1H3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trbv16A0A0B4J1H3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Trbv16A0A0B4J1H3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv16A0A0B4J1H3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trbv16A0A0B4J1H3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trbv16A0A0B4J1H3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trbv16A0A0B4J1H3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv16A0A0B4J1H3 Gm44428-201ENSMUST00000204474 874 ntBASIC15.57■□□□□ 0.08
Trbv16A0A0B4J1H3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv16A0A0B4J1H3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trbv16A0A0B4J1H3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv16A0A0B4J1H3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv16A0A0B4J1H3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv16A0A0B4J1H3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv16A0A0B4J1H3 Gm42418-201ENSMUST00000182010 1831 ntBASIC15.57■□□□□ 0.08
Trbv16A0A0B4J1H3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv16A0A0B4J1H3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv16A0A0B4J1H3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv16A0A0B4J1H3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv16A0A0B4J1H3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trbv16A0A0B4J1H3 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.56■□□□□ 0.08
Trbv16A0A0B4J1H3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv16A0A0B4J1H3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv16A0A0B4J1H3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv16A0A0B4J1H3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trbv16A0A0B4J1H3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv16A0A0B4J1H3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv16A0A0B4J1H3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trbv16A0A0B4J1H3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv16A0A0B4J1H3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv16A0A0B4J1H3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv16A0A0B4J1H3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC15.55■□□□□ 0.08
Trbv16A0A0B4J1H3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv16A0A0B4J1H3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv16A0A0B4J1H3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv16A0A0B4J1H3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv16A0A0B4J1H3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv16A0A0B4J1H3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trbv16A0A0B4J1H3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbv16A0A0B4J1H3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv16A0A0B4J1H3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms