Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.98■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.98■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.98■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.96■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.96■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Terc-201ENSMUST00000082862 423 ntBASIC18.95■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.94■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.92■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Sirpb1bA0A0A6YXN8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.9■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Gm5921-201ENSMUST00000075898 882 ntBASIC18.89■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.87■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Gm5812-201ENSMUST00000061073 957 ntBASIC18.87■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Sirpb1bA0A0A6YXN8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.86■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms