Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.98■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.98■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.98■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.96■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.96■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sirpb1bA0A0A6YXN8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Terc-201ENSMUST00000082862 423 ntBASIC18.95■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.94■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.92■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Sirpb1bA0A0A6YXN8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.9■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sirpb1bA0A0A6YXN8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Gm5921-201ENSMUST00000075898 882 ntBASIC18.89■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1bA0A0A6YXN8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.87■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Gm5812-201ENSMUST00000061073 957 ntBASIC18.87■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Sirpb1bA0A0A6YXN8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.86■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms