Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ighv1-43A0A0A6YXN5 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ighv1-43A0A0A6YXN5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ighv1-43A0A0A6YXN5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.08■□□□□ 0.81
Ighv1-43A0A0A6YXN5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Gm14117-201ENSMUST00000122417 843 ntBASIC20.07■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.06■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.06■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.05■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.04■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv1-43A0A0A6YXN5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.04■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.02■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ighv1-43A0A0A6YXN5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ighv1-43A0A0A6YXN5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Ighv1-43A0A0A6YXN5 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Etf1-202ENSMUST00000180351 108 ntBASIC20■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Gm5131-201ENSMUST00000212776 1238 ntBASIC20■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ighv1-43A0A0A6YXN5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.98■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.98■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ighv1-43A0A0A6YXN5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.97■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.97■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.97■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.97■□□□□ 0.79
Ighv1-43A0A0A6YXN5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.96■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv1-43A0A0A6YXN5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ighv1-43A0A0A6YXN5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ighv1-43A0A0A6YXN5 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ighv1-43A0A0A6YXN5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ighv1-43A0A0A6YXN5 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ighv1-43A0A0A6YXN5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.94■□□□□ 0.78
Ighv1-43A0A0A6YXN5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Ighv1-43A0A0A6YXN5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.94■□□□□ 0.78
Ighv1-43A0A0A6YXN5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ighv1-43A0A0A6YXN5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ighv1-43A0A0A6YXN5 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms