Protein–RNA interactions for Protein: P35269

GTF2F1, General transcription factor IIF subunit 1, humanhuman

Known RBP eCLIP

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1P35269 PPT2-EGFL8-201ENST00000421600 999 ntAPPRIS ALT2 TSL 519.69■□□□□ 0.743e-6■□□□□ 11
GTF2F1P35269 PPT2-EGFL8-203ENST00000428388 2878 ntAPPRIS P5 TSL 219.53■□□□□ 0.723e-6■□□□□ 11
GTF2F1P35269 PPT2-EGFL8-204ENST00000453656 1327 ntTSL 219.2■□□□□ 0.663e-6■□□□□ 11
GTF2F1P35269 PPT2-EGFL8-206ENST00000583227 1540 ntAPPRIS ALT2 TSL 518.54■□□□□ 0.563e-6■□□□□ 11
GTF2F1P35269 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -03e-6■□□□□ 11
GTF2F1P35269 PPT2-EGFL8-205ENST00000479001 944 ntTSL 511.76□□□□□ -0.533e-6■□□□□ 11
GTF2F1P35269 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.26■□□□□ 0.191e-9■□□□□ 11
GTF2F1P35269 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC15.18■□□□□ 0.021e-9■□□□□ 11
GTF2F1P35269 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.2■□□□□ 0.662e-7■□□□□ 11
GTF2F1P35269 GPR107-203ENST00000372410 6991 ntTSL 5 BASIC12.53□□□□□ -0.42e-11■□□□□ 11
GTF2F1P35269 GPR107-201ENST00000347136 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.442e-11■□□□□ 11
GTF2F1P35269 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC12.05□□□□□ -0.482e-11■□□□□ 11
GTF2F1P35269 DHX9-201ENST00000367549 4240 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.822e-7■□□□□ 11
GTF2F1P35269 LNPEP-203ENST00000395784 2075 ntTSL 228.12■■■□□ 2.092e-7■□□□□ 11
GTF2F1P35269 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.89■□□□□ 0.772e-7■□□□□ 11
GTF2F1P35269 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.72■□□□□ 0.592e-7■□□□□ 11
GTF2F1P35269 NDRG1-217ENST00000521414 2349 ntTSL 218.22■□□□□ 0.512e-7■□□□□ 11
GTF2F1P35269 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.48■□□□□ 0.392e-7■□□□□ 11
GTF2F1P35269 ZFP64-212ENST00000477786 909 ntTSL 516.76■□□□□ 0.272e-7■□□□□ 11
GTF2F1P35269 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.232e-7■□□□□ 11
GTF2F1P35269 NDRG1-216ENST00000521026 2145 ntTSL 216.26■□□□□ 0.192e-7■□□□□ 11
GTF2F1P35269 ZFP64-202ENST00000346617 2876 ntTSL 2 BASIC14.21□□□□□ -0.132e-7■□□□□ 11
GTF2F1P35269 ZFP64-204ENST00000371515 3040 ntTSL 1 (best) BASIC12.87□□□□□ -0.352e-7■□□□□ 11
GTF2F1P35269 ZFP64-210ENST00000461898 692 ntTSL 512.08□□□□□ -0.482e-7■□□□□ 11
GTF2F1P35269 NDRG1-212ENST00000519278 3983 ntTSL 211.69□□□□□ -0.542e-7■□□□□ 11
GTF2F1P35269 NDRG1-218ENST00000521438 2810 ntTSL 211.23□□□□□ -0.612e-7■□□□□ 11
GTF2F1P35269 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.912e-7■□□□□ 11
GTF2F1P35269 CTDNEP1-206ENST00000571409 741 ntTSL 533.81■■■■□ 37e-25■□□□□ 11
GTF2F1P35269 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.657e-25■□□□□ 11
GTF2F1P35269 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.167e-25■□□□□ 11
GTF2F1P35269 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.827e-25■□□□□ 11
GTF2F1P35269 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.76■□□□□ 0.757e-25■□□□□ 11
GTF2F1P35269 CTDNEP1-211ENST00000575783 876 ntTSL 519.06■□□□□ 0.647e-25■□□□□ 11
GTF2F1P35269 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC9.66□□□□□ -0.865e-52■□□□□ 11
GTF2F1P35269 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC8.72□□□□□ -1.015e-52■□□□□ 11
GTF2F1P35269 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.59□□□□□ -1.515e-52■□□□□ 11
GTF2F1P35269 MALAT1-216ENST00000620465 333 ntTSL 25.5□□□□□ -1.535e-52■□□□□ 11
GTF2F1P35269 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.15■■□□□ 1.35e-6■□□□□ 11
GTF2F1P35269 VIL1-202ENST00000392114 1968 ntTSL 2 BASIC12.85□□□□□ -0.355e-6■□□□□ 11
GTF2F1P35269 VIL1-201ENST00000248444 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.655e-6■□□□□ 11
GTF2F1P35269 LTBP4-209ENST00000594116 420 ntTSL 318.83■□□□□ 0.62e-8■□□□□ 11
GTF2F1P35269 LTBP4-204ENST00000318809 1700 ntTSL 218.51■□□□□ 0.552e-8■□□□□ 11
GTF2F1P35269 LTBP4-214ENST00000595665 576 ntTSL 417.73■□□□□ 0.432e-8■□□□□ 11
GTF2F1P35269 LTBP4-218ENST00000597816 692 ntTSL 317.73■□□□□ 0.432e-8■□□□□ 11
GTF2F1P35269 LTBP4-237ENST00000622107 590 ntTSL 416.48■□□□□ 0.232e-8■□□□□ 11
GTF2F1P35269 LTBP4-238ENST00000622457 547 ntTSL 212.98□□□□□ -0.332e-8■□□□□ 11
GTF2F1P35269 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC15.94■□□□□ 0.142e-7■□□□□ 10.9
GTF2F1P35269 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.112e-7■□□□□ 10.9
GTF2F1P35269 CDK5RAP1-208ENST00000471264 763 ntTSL 515.52■□□□□ 0.082e-7■□□□□ 10.9
GTF2F1P35269 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC14.9□□□□□ -0.022e-7■□□□□ 10.9
GTF2F1P35269 CDK5RAP1-205ENST00000460043 535 ntTSL 314.55□□□□□ -0.082e-7■□□□□ 10.9
GTF2F1P35269 CDK5RAP1-215ENST00000496381 858 ntTSL 314.27□□□□□ -0.132e-7■□□□□ 10.9
GTF2F1P35269 CDK5RAP1-207ENST00000461710 2650 ntTSL 213.88□□□□□ -0.192e-7■□□□□ 10.9
GTF2F1P35269 CDK5RAP1-216ENST00000498525 777 ntTSL 513.79□□□□□ -0.22e-7■□□□□ 10.9
GTF2F1P35269 CDK5RAP1-210ENST00000473997 1930 ntTSL 2 BASIC12.45□□□□□ -0.422e-7■□□□□ 10.9
GTF2F1P35269 CDK5RAP1-204ENST00000427097 974 ntTSL 510.15□□□□□ -0.782e-7■□□□□ 10.9
GTF2F1P35269 CDK5RAP1-212ENST00000481964 945 ntTSL 59.99□□□□□ -0.812e-7■□□□□ 10.9
GTF2F1P35269 CDK5RAP1-213ENST00000482967 840 ntTSL 39.99□□□□□ -0.812e-7■□□□□ 10.9
GTF2F1P35269 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC15.32■□□□□ 0.044e-11■□□□□ 10.9
GTF2F1P35269 CHTF8-201ENST00000306585 2561 ntBASIC14.44□□□□□ -0.14e-11■□□□□ 10.9
GTF2F1P35269 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.795e-6■□□□□ 10.9
GTF2F1P35269 EGFL8-221ENST00000432129 825 ntTSL 522.58■■□□□ 1.215e-6■□□□□ 10.9
GTF2F1P35269 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.76■■□□□ 1.718e-7■□□□□ 10.9
GTF2F1P35269 CUL4A-208ENST00000474116 866 ntTSL 220.15■□□□□ 0.828e-7■□□□□ 10.9
GTF2F1P35269 ITGA2-202ENST00000503810 3782 ntTSL 510.65□□□□□ -0.717e-8■□□□□ 10.9
GTF2F1P35269 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.197e-8■□□□□ 10.9
GTF2F1P35269 BCAM-209ENST00000590624 991 ntTSL 1 (best)22.2■■□□□ 1.148e-8■□□□□ 10.9
GTF2F1P35269 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.181e-17■□□□□ 10.8
GTF2F1P35269 AC046185.1-201ENST00000580553 2128 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.211e-17■□□□□ 10.8
GTF2F1P35269 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.43■■■□□ 2.32e-9■□□□□ 10.8
GTF2F1P35269 MALAT1-202ENST00000534336 8708 ntBASIC10.66□□□□□ -0.71e-27■□□□□ 10.8
GTF2F1P35269 CHD4-214ENST00000545942 1317 ntTSL 1 (best)25.47■■□□□ 1.672e-6■□□□□ 10.8
GTF2F1P35269 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.592e-6■□□□□ 10.8
GTF2F1P35269 LRRC29-203ENST00000409509 1410 ntTSL 1 (best)23.42■■□□□ 1.342e-6■□□□□ 10.8
GTF2F1P35269 CHD4-213ENST00000545584 553 ntTSL 422.23■■□□□ 1.152e-6■□□□□ 10.8
GTF2F1P35269 LRRC29-202ENST00000409037 1707 ntTSL 521.75■■□□□ 1.072e-6■□□□□ 10.8
GTF2F1P35269 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.052e-6■□□□□ 10.8
GTF2F1P35269 LRRC29-204ENST00000424285 785 ntTSL 320.95■□□□□ 0.942e-6■□□□□ 10.8
GTF2F1P35269 LRRC29-212ENST00000637894 1116 ntTSL 520.82■□□□□ 0.922e-6■□□□□ 10.8
GTF2F1P35269 LRRC29-208ENST00000485549 537 ntTSL 420.48■□□□□ 0.872e-6■□□□□ 10.8
GTF2F1P35269 LRRC29-205ENST00000433915 786 ntTSL 520.43■□□□□ 0.862e-6■□□□□ 10.8
GTF2F1P35269 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.842e-6■□□□□ 10.8
GTF2F1P35269 ANAPC2-207ENST00000495611 747 ntTSL 220.28■□□□□ 0.842e-6■□□□□ 10.8
GTF2F1P35269 LRRC29-206ENST00000447579 941 ntTSL 320.05■□□□□ 0.82e-6■□□□□ 10.8
GTF2F1P35269 LRRC29-210ENST00000637079 1634 nt19.68■□□□□ 0.742e-6■□□□□ 10.8
GTF2F1P35269 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.742e-6■□□□□ 10.8
GTF2F1P35269 LRRC29-211ENST00000637247 1468 ntTSL 1 (best)19.67■□□□□ 0.742e-6■□□□□ 10.8
GTF2F1P35269 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.722e-6■□□□□ 10.8
GTF2F1P35269 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.692e-6■□□□□ 10.8
GTF2F1P35269 MYADM-207ENST00000421337 1009 ntTSL 219.36■□□□□ 0.692e-6■□□□□ 10.8
GTF2F1P35269 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.592e-6■□□□□ 10.8
GTF2F1P35269 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.482e-6■□□□□ 10.8
GTF2F1P35269 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.362e-6■□□□□ 10.8
GTF2F1P35269 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.342e-6■□□□□ 10.8
GTF2F1P35269 LONP1-208ENST00000589473 793 ntTSL 317.09■□□□□ 0.332e-6■□□□□ 10.8
GTF2F1P35269 LRRC29-207ENST00000462169 778 ntTSL 216.58■□□□□ 0.242e-6■□□□□ 10.8
GTF2F1P35269 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.172e-6■□□□□ 10.8
GTF2F1P35269 MYADM-208ENST00000439000 841 ntTSL 315.85■□□□□ 0.132e-6■□□□□ 10.8
GTF2F1P35269 MYADM-206ENST00000414489 592 ntTSL 515.8■□□□□ 0.122e-6■□□□□ 10.8
GTF2F1P35269 MYADM-209ENST00000448420 777 ntTSL 214.87□□□□□ -0.032e-6■□□□□ 10.8
Retrieved 100 of 18,214 protein–RNA pairs in 296.8 ms