Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA13Q9Y5I0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA13Q9Y5I0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA13Q9Y5I0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA13Q9Y5I0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA13Q9Y5I0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA13Q9Y5I0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA13Q9Y5I0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA13Q9Y5I0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA13Q9Y5I0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA13Q9Y5I0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA13Q9Y5I0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA13Q9Y5I0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHA13Q9Y5I0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHA13Q9Y5I0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHA13Q9Y5I0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.65■■□□□ 1.7
PCDHA13Q9Y5I0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHA13Q9Y5I0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHA13Q9Y5I0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHA13Q9Y5I0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHA13Q9Y5I0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHA13Q9Y5I0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.64■■□□□ 1.69
PCDHA13Q9Y5I0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHA13Q9Y5I0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHA13Q9Y5I0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA13Q9Y5I0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA13Q9Y5I0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA13Q9Y5I0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.63■■□□□ 1.69
PCDHA13Q9Y5I0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHA13Q9Y5I0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHA13Q9Y5I0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHA13Q9Y5I0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHA13Q9Y5I0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHA13Q9Y5I0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHA13Q9Y5I0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.62■■□□□ 1.69
PCDHA13Q9Y5I0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHA13Q9Y5I0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.61■■□□□ 1.69
PCDHA13Q9Y5I0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHA13Q9Y5I0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHA13Q9Y5I0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
PCDHA13Q9Y5I0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHA13Q9Y5I0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
PCDHA13Q9Y5I0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHA13Q9Y5I0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
PCDHA13Q9Y5I0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.6■■□□□ 1.69
PCDHA13Q9Y5I0 ZNRF2P2-203ENST00000454624 420 ntBASIC25.6■■□□□ 1.69
PCDHA13Q9Y5I0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHA13Q9Y5I0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHA13Q9Y5I0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHA13Q9Y5I0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA13Q9Y5I0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA13Q9Y5I0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA13Q9Y5I0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHA13Q9Y5I0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHA13Q9Y5I0 AC097639.1-201ENST00000565519 1891 ntBASIC25.58■■□□□ 1.69
PCDHA13Q9Y5I0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.58■■□□□ 1.69
PCDHA13Q9Y5I0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.58■■□□□ 1.69
PCDHA13Q9Y5I0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA13Q9Y5I0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA13Q9Y5I0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA13Q9Y5I0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA13Q9Y5I0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA13Q9Y5I0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA13Q9Y5I0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA13Q9Y5I0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHA13Q9Y5I0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDHA13Q9Y5I0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHA13Q9Y5I0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDHA13Q9Y5I0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHA13Q9Y5I0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.56■■□□□ 1.68
PCDHA13Q9Y5I0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDHA13Q9Y5I0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDHA13Q9Y5I0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.56■■□□□ 1.68
PCDHA13Q9Y5I0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHA13Q9Y5I0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHA13Q9Y5I0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
PCDHA13Q9Y5I0 SLC6A10P-202ENST00000431994 2058 ntBASIC25.56■■□□□ 1.68
PCDHA13Q9Y5I0 AP003733.4-201ENST00000623785 1697 ntBASIC25.55■■□□□ 1.68
PCDHA13Q9Y5I0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA13Q9Y5I0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
PCDHA13Q9Y5I0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.55■■□□□ 1.68
PCDHA13Q9Y5I0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.55■■□□□ 1.68
PCDHA13Q9Y5I0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
PCDHA13Q9Y5I0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA13Q9Y5I0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHA13Q9Y5I0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHA13Q9Y5I0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHA13Q9Y5I0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
PCDHA13Q9Y5I0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHA13Q9Y5I0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
PCDHA13Q9Y5I0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.54■■□□□ 1.68
PCDHA13Q9Y5I0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHA13Q9Y5I0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
PCDHA13Q9Y5I0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.54■■□□□ 1.68
PCDHA13Q9Y5I0 LINC01124-201ENST00000409786 2117 ntBASIC25.54■■□□□ 1.68
PCDHA13Q9Y5I0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHA13Q9Y5I0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
PCDHA13Q9Y5I0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.53■■□□□ 1.68
PCDHA13Q9Y5I0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
PCDHA13Q9Y5I0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms