Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 EIF4A2-213ENST00000465792 734 ntTSL 23.8□□□□□ -1.81e-323■■■■□ 22.3
DDX52Q9Y2R4 MIR1248-201ENST00000629190 106 ntBASIC2.37□□□□□ -2.031e-323■■■■□ 22.3
DDX52Q9Y2R4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.263e-6■■■■□ 22.2
DDX52Q9Y2R4 GAS6-202ENST00000476291 537 ntTSL 225.17■■□□□ 1.621e-6■■■■□ 22.2
DDX52Q9Y2R4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC23.23■■□□□ 1.318e-7■■■■□ 22.2
DDX52Q9Y2R4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.519e-7■■■■□ 22.2
DDX52Q9Y2R4 TMC6-222ENST00000592076 693 ntTSL 319.25■□□□□ 0.673e-8■■■■□ 22.1
DDX52Q9Y2R4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.576e-7■■■■□ 22.1
DDX52Q9Y2R4 PHRF1-206ENST00000534320 5178 ntTSL 518.46■□□□□ 0.556e-7■■■■□ 22.1
DDX52Q9Y2R4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.56e-7■■■■□ 22.1
DDX52Q9Y2R4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.226e-7■■■■□ 22.1
DDX52Q9Y2R4 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.031e-6■■■■□ 22.1
DDX52Q9Y2R4 UBE2J2-208ENST00000450390 2455 ntTSL 525.26■■□□□ 1.632e-6■■■■□ 22.1
DDX52Q9Y2R4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.86■■□□□ 1.412e-6■■■■□ 22.1
DDX52Q9Y2R4 UBE2J2-207ENST00000435198 1056 ntTSL 331.21■■■□□ 2.593e-6■■■■□ 22.1
DDX52Q9Y2R4 UBE2J2-210ENST00000464036 1256 ntTSL 327.97■■■□□ 2.073e-6■■■■□ 22.1
DDX52Q9Y2R4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.753e-6■■■■□ 22.1
DDX52Q9Y2R4 UBE2J2-214ENST00000473215 1028 ntTSL 325.56■■□□□ 1.683e-6■■■■□ 22.1
DDX52Q9Y2R4 UBE2J2-220ENST00000509720 472 ntTSL 322.77■■□□□ 1.243e-6■■■■□ 22.1
DDX52Q9Y2R4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.49■■□□□ 1.033e-6■■■■□ 22.1
DDX52Q9Y2R4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.84■□□□□ 0.933e-6■■■■□ 22.1
DDX52Q9Y2R4 EGFL7-205ENST00000490469 456 ntTSL 520.38■□□□□ 0.858e-7■■■■□ 22
DDX52Q9Y2R4 PPP2R2D-207ENST00000616467 2058 ntTSL 1 (best)30.03■■■□□ 2.45e-7■■■■□ 22
DDX52Q9Y2R4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.335e-7■■■■□ 22
DDX52Q9Y2R4 PPP2R2D-204ENST00000482010 1792 ntTSL 221.93■■□□□ 1.15e-7■■■■□ 22
DDX52Q9Y2R4 PPP2R2D-202ENST00000470416 6203 ntTSL 1 (best)10.64□□□□□ -0.715e-7■■■■□ 22
DDX52Q9Y2R4 CXXC5-209ENST00000507139 472 ntTSL 425.73■■□□□ 1.711e-6■■■■□ 21.9
DDX52Q9Y2R4 CXXC5-206ENST00000504844 777 ntTSL 225.01■■□□□ 1.591e-6■■■■□ 21.9
DDX52Q9Y2R4 CXXC5-203ENST00000502336 581 ntTSL 423.33■■□□□ 1.331e-6■■■■□ 21.9
DDX52Q9Y2R4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.081e-6■■■■□ 21.9
DDX52Q9Y2R4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.911e-6■■■■□ 21.9
DDX52Q9Y2R4 CXXC5-202ENST00000502295 503 ntTSL 419.41■□□□□ 0.71e-6■■■■□ 21.9
DDX52Q9Y2R4 CXXC5-216ENST00000520967 878 ntTSL 318.85■□□□□ 0.611e-6■■■■□ 21.9
DDX52Q9Y2R4 CXXC5-207ENST00000504944 568 ntTSL 316.91■□□□□ 0.31e-6■■■■□ 21.9
DDX52Q9Y2R4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.831e-7■■■■□ 21.9
DDX52Q9Y2R4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.24e-6■■■■□ 21.8
DDX52Q9Y2R4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.75■□□□□ 0.754e-6■■■■□ 21.8
DDX52Q9Y2R4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.77■□□□□ 0.64e-6■■■■□ 21.8
DDX52Q9Y2R4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.67■□□□□ 0.584e-6■■■■□ 21.8
DDX52Q9Y2R4 PDCD6-203ENST00000505526 1484 ntTSL 1 (best)18.42■□□□□ 0.544e-6■■■■□ 21.8
DDX52Q9Y2R4 PDCD6-204ENST00000506909 458 ntTSL 316.12■□□□□ 0.174e-6■■■■□ 21.8
DDX52Q9Y2R4 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.144e-6■■■■□ 21.8
DDX52Q9Y2R4 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC15.95■□□□□ 0.144e-6■■■■□ 21.8
DDX52Q9Y2R4 PDCD6-210ENST00000513582 3500 ntTSL 211.7□□□□□ -0.544e-6■■■■□ 21.8
DDX52Q9Y2R4 PDCD6-205ENST00000507473 486 ntTSL 39.16□□□□□ -0.944e-6■■■■□ 21.8
DDX52Q9Y2R4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.162e-6■■■■□ 21.8
DDX52Q9Y2R4 CBFA2T3-211ENST00000570046 284 ntTSL 311.52□□□□□ -0.572e-6■■■■□ 21.8
DDX52Q9Y2R4 CSNK1D-221ENST00000582844 957 ntTSL 525.3■■□□□ 1.641e-6■■■■□ 21.8
DDX52Q9Y2R4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.261e-6■■■■□ 21.8
DDX52Q9Y2R4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.63■□□□□ 0.891e-6■■■■□ 21.8
DDX52Q9Y2R4 CSNK1D-205ENST00000403276 1040 ntTSL 219.97■□□□□ 0.791e-6■■■■□ 21.8
DDX52Q9Y2R4 CSNK1D-223ENST00000584472 586 ntTSL 418.88■□□□□ 0.611e-6■■■■□ 21.8
DDX52Q9Y2R4 CSNK1D-212ENST00000580061 578 ntTSL 318.87■□□□□ 0.611e-6■■■■□ 21.8
DDX52Q9Y2R4 CSNK1D-213ENST00000580446 612 ntTSL 316.46■□□□□ 0.231e-6■■■■□ 21.8
DDX52Q9Y2R4 CSNK1D-219ENST00000581660 611 ntTSL 516.34■□□□□ 0.211e-6■■■■□ 21.8
DDX52Q9Y2R4 CSNK1D-211ENST00000579316 692 ntTSL 216.34■□□□□ 0.211e-6■■■■□ 21.8
DDX52Q9Y2R4 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.091e-6■■■■□ 21.8
DDX52Q9Y2R4 CSNK1D-207ENST00000578194 567 ntTSL 415.05■□□□□ -01e-6■■■■□ 21.8
DDX52Q9Y2R4 CSNK1D-217ENST00000581241 6094 ntTSL 214.72□□□□□ -0.051e-6■■■■□ 21.8
DDX52Q9Y2R4 CSNK1D-226ENST00000585026 563 ntTSL 512.64□□□□□ -0.391e-6■■■■□ 21.8
DDX52Q9Y2R4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.63■■□□□ 1.371e-6■■■■□ 21.7
DDX52Q9Y2R4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.691e-6■■■■□ 21.7
DDX52Q9Y2R4 RPH3AL-219ENST00000576001 647 ntTSL 318.35■□□□□ 0.531e-6■■■■□ 21.7
DDX52Q9Y2R4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.41e-6■■■■□ 21.7
DDX52Q9Y2R4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.34■□□□□ 0.371e-6■■■■□ 21.7
DDX52Q9Y2R4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.064e-7■■■■□ 21.7
DDX52Q9Y2R4 RNU6-9-201ENST00000384776 107 ntBASIC2.93□□□□□ -1.941e-323■■■■□ 21.7
DDX52Q9Y2R4 ABO-201ENST00000453660 6341 ntTSL 1 (best)12.87□□□□□ -0.357e-8■■■■□ 21.7
DDX52Q9Y2R4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.69■□□□□ 0.91e-6■■■■□ 21.7
DDX52Q9Y2R4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.06■□□□□ 0.84e-10■■■■□ 21.6
DDX52Q9Y2R4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.19■□□□□ 0.54e-10■■■■□ 21.6
DDX52Q9Y2R4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.18■□□□□ 0.54e-10■■■■□ 21.6
DDX52Q9Y2R4 PRKN-207ENST00000479615 904 ntTSL 517.84■□□□□ 0.454e-10■■■■□ 21.6
DDX52Q9Y2R4 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.53■□□□□ 0.244e-10■■■■□ 21.6
DDX52Q9Y2R4 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC15.09■□□□□ 0.014e-10■■■■□ 21.6
DDX52Q9Y2R4 PRKN-206ENST00000366898 4180 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.434e-10■■■■□ 21.6
DDX52Q9Y2R4 GATA2-AS1-203ENST00000473958 722 ntTSL 327.38■■□□□ 1.971e-6■■■■□ 21.6
DDX52Q9Y2R4 ABHD17A-203ENST00000588598 5425 ntTSL 220.42■□□□□ 0.862e-6■■■■□ 21.5
DDX52Q9Y2R4 ABHD17A-205ENST00000591351 4647 ntTSL 218.92■□□□□ 0.622e-6■■■■□ 21.5
DDX52Q9Y2R4 TMC6-219ENST00000591594 614 ntTSL 319.95■□□□□ 0.784e-7■■■■□ 21.5
DDX52Q9Y2R4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.071e-22■■■■□ 21.5
DDX52Q9Y2R4 PDE3A-202ENST00000542675 685 ntTSL 314.03□□□□□ -0.161e-22■■■■□ 21.5
DDX52Q9Y2R4 NOL4L-209ENST00000485364 885 ntTSL 1 (best)28.46■■■□□ 2.152e-6■■■■□ 21.5
DDX52Q9Y2R4 MVD-212ENST00000565842 285 ntTSL 328.61■■■□□ 2.172e-12■■■■□ 21.4
DDX52Q9Y2R4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.782e-12■■■■□ 21.4
DDX52Q9Y2R4 MVD-204ENST00000562741 217 ntTSL 225.2■■□□□ 1.622e-12■■■■□ 21.4
DDX52Q9Y2R4 MVD-210ENST00000565610 507 ntTSL 323.51■■□□□ 1.352e-12■■■■□ 21.4
DDX52Q9Y2R4 MVD-208ENST00000563785 888 ntTSL 222.35■■□□□ 1.172e-12■■■■□ 21.4
DDX52Q9Y2R4 MVD-214ENST00000567064 758 ntTSL 322.23■■□□□ 1.152e-12■■■■□ 21.4
DDX52Q9Y2R4 MVD-216ENST00000568709 809 ntTSL 522.11■■□□□ 1.132e-12■■■■□ 21.4
DDX52Q9Y2R4 MVD-217ENST00000569177 870 ntTSL 520.17■□□□□ 0.822e-12■■■■□ 21.4
DDX52Q9Y2R4 MVD-206ENST00000563170 904 ntTSL 319.58■□□□□ 0.722e-12■■■■□ 21.4
DDX52Q9Y2R4 MVD-215ENST00000568133 853 ntTSL 319.56■□□□□ 0.722e-12■■■■□ 21.4
DDX52Q9Y2R4 MVD-207ENST00000563463 543 ntTSL 318.64■□□□□ 0.572e-12■■■■□ 21.4
DDX52Q9Y2R4 EHMT1-248ENST00000637891 1930 ntTSL 519.01■□□□□ 0.636e-6■■■■□ 21.4
DDX52Q9Y2R4 EHMT1-205ENST00000462942 7842 ntTSL 210.73□□□□□ -0.696e-6■■■■□ 21.4
DDX52Q9Y2R4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.746e-7■■■■□ 21.4
DDX52Q9Y2R4 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.146e-7■■■■□ 21.4
DDX52Q9Y2R4 FAM120B-201ENST00000476287 5155 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.756e-7■■■■□ 21.4
DDX52Q9Y2R4 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.966e-7■■■■□ 21.4
Retrieved 100 of 4,483 protein–RNA pairs in 76.1 ms