Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SPG7Q9UQ90 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SPG7Q9UQ90 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SPG7Q9UQ90 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC31.82■■■□□ 2.68
SPG7Q9UQ90 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SPG7Q9UQ90 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC31.82■■■□□ 2.68
SPG7Q9UQ90 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
SPG7Q9UQ90 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SPG7Q9UQ90 CREM-229ENST00000474362 1030 ntTSL 2 BASIC31.81■■■□□ 2.68
SPG7Q9UQ90 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SPG7Q9UQ90 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SPG7Q9UQ90 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SPG7Q9UQ90 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC31.8■■■□□ 2.68
SPG7Q9UQ90 AC142472.1-201ENST00000612013 1741 ntBASIC31.8■■■□□ 2.68
SPG7Q9UQ90 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
SPG7Q9UQ90 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
SPG7Q9UQ90 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
SPG7Q9UQ90 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
SPG7Q9UQ90 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
SPG7Q9UQ90 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.79■■■□□ 2.68
SPG7Q9UQ90 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.78■■■□□ 2.68
SPG7Q9UQ90 KRT18P24-201ENST00000344739 1156 ntBASIC31.78■■■□□ 2.68
SPG7Q9UQ90 KRT125P-201ENST00000546827 989 ntBASIC31.78■■■□□ 2.68
SPG7Q9UQ90 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.78■■■□□ 2.68
SPG7Q9UQ90 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SPG7Q9UQ90 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
SPG7Q9UQ90 BX664725.1-201ENST00000438252 379 ntBASIC31.77■■■□□ 2.68
SPG7Q9UQ90 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.68
SPG7Q9UQ90 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SPG7Q9UQ90 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
SPG7Q9UQ90 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.76■■■□□ 2.67
SPG7Q9UQ90 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC31.76■■■□□ 2.67
SPG7Q9UQ90 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
SPG7Q9UQ90 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
SPG7Q9UQ90 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC31.75■■■□□ 2.67
SPG7Q9UQ90 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SPG7Q9UQ90 MIR4787-201ENST00000607364 84 ntBASIC31.74■■■□□ 2.67
SPG7Q9UQ90 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
SPG7Q9UQ90 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SPG7Q9UQ90 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
SPG7Q9UQ90 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
SPG7Q9UQ90 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SPG7Q9UQ90 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC31.72■■■□□ 2.67
SPG7Q9UQ90 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
SPG7Q9UQ90 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC31.72■■■□□ 2.67
SPG7Q9UQ90 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
SPG7Q9UQ90 GRAMD4P7-201ENST00000578182 1232 ntBASIC31.72■■■□□ 2.67
SPG7Q9UQ90 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC31.72■■■□□ 2.67
SPG7Q9UQ90 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.71■■■□□ 2.67
SPG7Q9UQ90 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC31.71■■■□□ 2.67
SPG7Q9UQ90 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SPG7Q9UQ90 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SPG7Q9UQ90 AC019069.1-201ENST00000610008 1333 ntBASIC31.71■■■□□ 2.67
SPG7Q9UQ90 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
SPG7Q9UQ90 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
SPG7Q9UQ90 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC31.7■■■□□ 2.67
SPG7Q9UQ90 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC31.7■■■□□ 2.67
SPG7Q9UQ90 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.66
SPG7Q9UQ90 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.66
SPG7Q9UQ90 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SPG7Q9UQ90 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SPG7Q9UQ90 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SPG7Q9UQ90 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SPG7Q9UQ90 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC31.69■■■□□ 2.66
SPG7Q9UQ90 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SPG7Q9UQ90 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SPG7Q9UQ90 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SPG7Q9UQ90 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SPG7Q9UQ90 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC31.68■■■□□ 2.66
SPG7Q9UQ90 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC31.68■■■□□ 2.66
SPG7Q9UQ90 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC31.68■■■□□ 2.66
SPG7Q9UQ90 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
SPG7Q9UQ90 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
SPG7Q9UQ90 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SPG7Q9UQ90 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
SPG7Q9UQ90 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC31.67■■■□□ 2.66
SPG7Q9UQ90 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
SPG7Q9UQ90 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
SPG7Q9UQ90 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SPG7Q9UQ90 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.66■■■□□ 2.66
SPG7Q9UQ90 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC31.66■■■□□ 2.66
SPG7Q9UQ90 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC31.66■■■□□ 2.66
SPG7Q9UQ90 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC31.65■■■□□ 2.66
SPG7Q9UQ90 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SPG7Q9UQ90 AC120024.1-201ENST00000562672 995 ntBASIC31.65■■■□□ 2.66
SPG7Q9UQ90 AC137630.3-201ENST00000607245 391 ntBASIC31.65■■■□□ 2.66
SPG7Q9UQ90 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
SPG7Q9UQ90 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
SPG7Q9UQ90 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SPG7Q9UQ90 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC31.64■■■□□ 2.66
SPG7Q9UQ90 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC31.64■■■□□ 2.66
SPG7Q9UQ90 UNC93B8-201ENST00000511903 705 ntBASIC31.64■■■□□ 2.66
SPG7Q9UQ90 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC31.64■■■□□ 2.65
SPG7Q9UQ90 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC31.64■■■□□ 2.65
SPG7Q9UQ90 AP004609.3-201ENST00000610705 1884 ntBASIC31.63■■■□□ 2.65
SPG7Q9UQ90 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC31.63■■■□□ 2.65
SPG7Q9UQ90 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SPG7Q9UQ90 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC31.62■■■□□ 2.65
SPG7Q9UQ90 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC31.62■■■□□ 2.65
SPG7Q9UQ90 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC31.62■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms