Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
PDZRN3Q9UPQ7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC31.06■■■□□ 2.56
PDZRN3Q9UPQ7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.06■■■□□ 2.56
PDZRN3Q9UPQ7 AC131212.1-201ENST00000613771 668 ntBASIC31.06■■■□□ 2.56
PDZRN3Q9UPQ7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PDZRN3Q9UPQ7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.05■■■□□ 2.56
PDZRN3Q9UPQ7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.05■■■□□ 2.56
PDZRN3Q9UPQ7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.05■■■□□ 2.56
PDZRN3Q9UPQ7 OR2A1-AS1-204ENST00000470435 602 ntBASIC31.05■■■□□ 2.56
PDZRN3Q9UPQ7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.05■■■□□ 2.56
PDZRN3Q9UPQ7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC31.05■■■□□ 2.56
PDZRN3Q9UPQ7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.04■■■□□ 2.56
PDZRN3Q9UPQ7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
PDZRN3Q9UPQ7 PVT1_1.1-201ENST00000615125 194 ntBASIC31.04■■■□□ 2.56
PDZRN3Q9UPQ7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
PDZRN3Q9UPQ7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
PDZRN3Q9UPQ7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
PDZRN3Q9UPQ7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.03■■■□□ 2.56
PDZRN3Q9UPQ7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
PDZRN3Q9UPQ7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
PDZRN3Q9UPQ7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.02■■■□□ 2.56
PDZRN3Q9UPQ7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PDZRN3Q9UPQ7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC31.02■■■□□ 2.56
PDZRN3Q9UPQ7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC31.02■■■□□ 2.56
PDZRN3Q9UPQ7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC31.02■■■□□ 2.56
PDZRN3Q9UPQ7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC31.01■■■□□ 2.55
PDZRN3Q9UPQ7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.01■■■□□ 2.55
PDZRN3Q9UPQ7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31■■■□□ 2.55
PDZRN3Q9UPQ7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31■■■□□ 2.55
PDZRN3Q9UPQ7 THA1P-201ENST00000590384 1145 ntBASIC31■■■□□ 2.55
PDZRN3Q9UPQ7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC31■■■□□ 2.55
PDZRN3Q9UPQ7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC31■■■□□ 2.55
PDZRN3Q9UPQ7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
PDZRN3Q9UPQ7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
PDZRN3Q9UPQ7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
PDZRN3Q9UPQ7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.98■■■□□ 2.55
PDZRN3Q9UPQ7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
PDZRN3Q9UPQ7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PDZRN3Q9UPQ7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
PDZRN3Q9UPQ7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PDZRN3Q9UPQ7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PDZRN3Q9UPQ7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC30.96■■■□□ 2.55
PDZRN3Q9UPQ7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC30.95■■■□□ 2.55
PDZRN3Q9UPQ7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
PDZRN3Q9UPQ7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.55
PDZRN3Q9UPQ7 AP004609.3-201ENST00000610705 1884 ntBASIC30.95■■■□□ 2.54
PDZRN3Q9UPQ7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.54
PDZRN3Q9UPQ7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
PDZRN3Q9UPQ7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
PDZRN3Q9UPQ7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
PDZRN3Q9UPQ7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
PDZRN3Q9UPQ7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
PDZRN3Q9UPQ7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
PDZRN3Q9UPQ7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC30.93■■■□□ 2.54
PDZRN3Q9UPQ7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
PDZRN3Q9UPQ7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC30.92■■■□□ 2.54
PDZRN3Q9UPQ7 AL031848.2-201ENST00000607670 837 ntBASIC30.92■■■□□ 2.54
PDZRN3Q9UPQ7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
PDZRN3Q9UPQ7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
PDZRN3Q9UPQ7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
PDZRN3Q9UPQ7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.91■■■□□ 2.54
PDZRN3Q9UPQ7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
PDZRN3Q9UPQ7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
PDZRN3Q9UPQ7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC30.91■■■□□ 2.54
PDZRN3Q9UPQ7 AC103724.3-201ENST00000564481 992 ntBASIC30.91■■■□□ 2.54
PDZRN3Q9UPQ7 AC019171.1-201ENST00000601251 1056 ntBASIC30.91■■■□□ 2.54
PDZRN3Q9UPQ7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC30.91■■■□□ 2.54
PDZRN3Q9UPQ7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
PDZRN3Q9UPQ7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
PDZRN3Q9UPQ7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
PDZRN3Q9UPQ7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.9■■■□□ 2.54
PDZRN3Q9UPQ7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC30.9■■■□□ 2.54
PDZRN3Q9UPQ7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
PDZRN3Q9UPQ7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
PDZRN3Q9UPQ7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.9■■■□□ 2.54
PDZRN3Q9UPQ7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC30.9■■■□□ 2.54
PDZRN3Q9UPQ7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.9■■■□□ 2.54
PDZRN3Q9UPQ7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.89■■■□□ 2.54
PDZRN3Q9UPQ7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
PDZRN3Q9UPQ7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
PDZRN3Q9UPQ7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC30.89■■■□□ 2.54
PDZRN3Q9UPQ7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
PDZRN3Q9UPQ7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
PDZRN3Q9UPQ7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PDZRN3Q9UPQ7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
PDZRN3Q9UPQ7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.87■■■□□ 2.53
PDZRN3Q9UPQ7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
PDZRN3Q9UPQ7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
PDZRN3Q9UPQ7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PDZRN3Q9UPQ7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC30.86■■■□□ 2.53
PDZRN3Q9UPQ7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC30.86■■■□□ 2.53
PDZRN3Q9UPQ7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
PDZRN3Q9UPQ7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PDZRN3Q9UPQ7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PDZRN3Q9UPQ7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC30.85■■■□□ 2.53
PDZRN3Q9UPQ7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
PDZRN3Q9UPQ7 AL356441.2-201ENST00000443009 864 ntBASIC30.85■■■□□ 2.53
PDZRN3Q9UPQ7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
PDZRN3Q9UPQ7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
PDZRN3Q9UPQ7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms