Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TREM2Q9NZC2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TREM2Q9NZC2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TREM2Q9NZC2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.63■□□□□ 0.89
TREM2Q9NZC2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TREM2Q9NZC2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TREM2Q9NZC2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TREM2Q9NZC2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TREM2Q9NZC2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
TREM2Q9NZC2 DUSP8P4-201ENST00000399538 1761 ntBASIC20.62■□□□□ 0.89
TREM2Q9NZC2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TREM2Q9NZC2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TREM2Q9NZC2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.62■□□□□ 0.89
TREM2Q9NZC2 AC092803.2-201ENST00000564287 1899 ntBASIC20.62■□□□□ 0.89
TREM2Q9NZC2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TREM2Q9NZC2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TREM2Q9NZC2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TREM2Q9NZC2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TREM2Q9NZC2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TREM2Q9NZC2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TREM2Q9NZC2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.61■□□□□ 0.89
TREM2Q9NZC2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.61■□□□□ 0.89
TREM2Q9NZC2 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.61■□□□□ 0.89
TREM2Q9NZC2 DUX4L18-201ENST00000553347 1267 ntBASIC20.61■□□□□ 0.89
TREM2Q9NZC2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TREM2Q9NZC2 AC129492.7-201ENST00000622992 756 ntBASIC20.61■□□□□ 0.89
TREM2Q9NZC2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TREM2Q9NZC2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.61■□□□□ 0.89
TREM2Q9NZC2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.6■□□□□ 0.89
TREM2Q9NZC2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TREM2Q9NZC2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
TREM2Q9NZC2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TREM2Q9NZC2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TREM2Q9NZC2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TREM2Q9NZC2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TREM2Q9NZC2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TREM2Q9NZC2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.59■□□□□ 0.89
TREM2Q9NZC2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TREM2Q9NZC2 RAP2CP1-202ENST00000605179 643 ntBASIC20.59■□□□□ 0.89
TREM2Q9NZC2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
TREM2Q9NZC2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TREM2Q9NZC2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.59■□□□□ 0.89
TREM2Q9NZC2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TREM2Q9NZC2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TREM2Q9NZC2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TREM2Q9NZC2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.58■□□□□ 0.89
TREM2Q9NZC2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.58■□□□□ 0.89
TREM2Q9NZC2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TREM2Q9NZC2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TREM2Q9NZC2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.58■□□□□ 0.88
TREM2Q9NZC2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.58■□□□□ 0.88
TREM2Q9NZC2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TREM2Q9NZC2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TREM2Q9NZC2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.57■□□□□ 0.88
TREM2Q9NZC2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TREM2Q9NZC2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TREM2Q9NZC2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TREM2Q9NZC2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TREM2Q9NZC2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TREM2Q9NZC2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.56■□□□□ 0.88
TREM2Q9NZC2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TREM2Q9NZC2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.56■□□□□ 0.88
TREM2Q9NZC2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TREM2Q9NZC2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TREM2Q9NZC2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TREM2Q9NZC2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
TREM2Q9NZC2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TREM2Q9NZC2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TREM2Q9NZC2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TREM2Q9NZC2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TREM2Q9NZC2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TREM2Q9NZC2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TREM2Q9NZC2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
TREM2Q9NZC2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
TREM2Q9NZC2 SPCS2P3-201ENST00000500401 656 ntBASIC20.54■□□□□ 0.88
TREM2Q9NZC2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TREM2Q9NZC2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TREM2Q9NZC2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TREM2Q9NZC2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.53■□□□□ 0.88
TREM2Q9NZC2 DUX4L9-201ENST00000449051 1259 ntBASIC20.53■□□□□ 0.88
TREM2Q9NZC2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TREM2Q9NZC2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TREM2Q9NZC2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TREM2Q9NZC2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.53■□□□□ 0.88
TREM2Q9NZC2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TREM2Q9NZC2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TREM2Q9NZC2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TREM2Q9NZC2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
TREM2Q9NZC2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TREM2Q9NZC2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TREM2Q9NZC2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.52■□□□□ 0.87
TREM2Q9NZC2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
TREM2Q9NZC2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TREM2Q9NZC2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.51■□□□□ 0.87
TREM2Q9NZC2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TREM2Q9NZC2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.51■□□□□ 0.87
TREM2Q9NZC2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TREM2Q9NZC2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TREM2Q9NZC2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.51■□□□□ 0.87
TREM2Q9NZC2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms